Pairwise Alignments

Query, 700 a.a., ATP-dependent DNA helicase Rep from Variovorax sp. SCN45

Subject, 705 a.a., ATP-dependent helicase from Variovorax sp. OAS795

 Score =  182 bits (461), Expect = 6e-50
 Identities = 140/445 (31%), Positives = 210/445 (47%), Gaps = 37/445 (8%)

Query: 4   GLNPAQLEAVNYMYG--------PCLVLAGAGSGKTRVITHKIGRLIQSGLEPQRIAAIT 55
           GLN AQ  AV +  G        P LV+AGAGSGKT  + H++  LI  G++PQR+  +T
Sbjct: 26  GLNDAQRAAVEHGIGTLVGRDERPLLVIAGAGSGKTSTLAHRVAHLIAGGVDPQRLLLLT 85

Query: 56  FTNKAAAEMRERAKDLIG--------KDARKVVVCTFHALGVRMMREDGAVLGLKKAFSI 107
           F+ +AA EM  RA  ++         K        TFH +G R++RE  A +GLK  F+I
Sbjct: 86  FSRRAAIEMERRAGQVLARVLGFKSEKPPALPWAGTFHGIGARLLREYAAHIGLKDNFTI 145

Query: 108 LD---SDDVTKILKDAGGTTDIATARIWQWTISKWKNMGLNAKQAEAAAVDDN------- 157
            D   ++D+  +++   G +        + T     +  +N +   A  +          
Sbjct: 146 HDRGDAEDLMGLVRHEIGLSSSVNRFPRKGTCLAIYSRCVNTRAPLADVLAQAFPWCAEW 205

Query: 158 ERITARIMAHYEERLQAYQSVDFDDLIGMPLKLLYEFPEVRAKWQAALGHILVDEYQDTN 217
           E    R+   Y E  Q    +D+DDL+     ++ E P +     A   H+LVDEYQDTN
Sbjct: 206 EAELKRLFGAYVEAKQQQNVLDYDDLLLYWAGMVAE-PALAELVGARFDHVLVDEYQDTN 264

Query: 218 ATQYEVLKALAGERGHFTAVGDDDQSIYGWRGATLDNLRKLPVDF-PTLKVIKLEQNYRS 276
             Q  +L AL  +    T VGDD QSIY +RGAT+ N+   P  F    +V+ LE+NYRS
Sbjct: 265 LLQASILLALKPDGRGVTVVGDDAQSIYSFRGATVRNILDFPSQFSQAARVVTLERNYRS 324

Query: 277 TSAILRAANNVIGPNPKLFPKTLFSELGEGEPVRIVDADSELHEAERAVARIVSLRAGDA 336
           T  IL  +N VI    +   KTL+++       ++V    E  +A     ++++ R G  
Sbjct: 325 TQPILDVSNRVIAHAAERHAKTLWTDKPSAGRPQLVLVPDEAQQAVWVADKVLAHREGGL 384

Query: 337 TTQGKQYKEFRDFAILYRANHQARVFEQALRKAQIPYKVSGGQSFFDRAEIKDLCGWFRL 396
             + +        A+L+RA+  +   E  L +  IP+   GG  F + + +KDL    R 
Sbjct: 385 ALKSQ--------AVLFRASTHSAPLELELARRNIPFVKYGGLKFLEASHVKDLLAVLRF 436

Query: 397 WVNNDDDPAFLRAITTPKRGIGHTT 421
             N     A  R +T    GIG  T
Sbjct: 437 AENPRGRMAGFR-VTQLIPGIGPAT 460



 Score = 52.4 bits (124), Expect = 8e-11
 Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 11/71 (15%)

Query: 565 DQDVVTLSTLHASKGLEWPHVMLIGVSEGLLPFKLDDDNGRQQKVSEDTLQRLQEERRLM 624
           D+D + LST+H++KG EW  V ++ V +G LP   D   G Q+         L+EERRL+
Sbjct: 576 DEDYLILSTIHSAKGQEWNSVHVLNVVDGCLP--ADVAQGAQE---------LEEERRLL 624

Query: 625 YVGITRAQRSL 635
           YV +TRA+  L
Sbjct: 625 YVAMTRARDHL 635