Pairwise Alignments

Query, 726 a.a., Helicase PriA essential for oriC/DnaA-independent DNA replication from Variovorax sp. SCN45

Subject, 739 a.a., primosome assembly protein from Pseudomonas putida KT2440

 Score =  457 bits (1177), Expect = e-133
 Identities = 262/567 (46%), Positives = 344/567 (60%), Gaps = 41/567 (7%)

Query: 166 IALSAEQTAALERI---EAASGTFLLVGSTGSGKTEVYLRCVADLLAREPEAQALVMVPE 222
           + L+ EQ  A + +       G FLL G TGSGKTEVYL+ + + L  E   QALV++PE
Sbjct: 201 LPLNEEQREAFDAVCEGFGGFGAFLLAGVTGSGKTEVYLQLIRETL--EAGKQALVLIPE 258

Query: 223 INLTPQLEARFKARFGEEAVVSLHSGMTNPQRLASWLAAHSGGARIVLGTRMAVFASIPG 282
           INL PQ  ARF+ RF    +  LHS + + +RL +WLAA  G A I++GTR A+F  +  
Sbjct: 259 INLGPQTLARFEQRFNAR-IALLHSAVNDRERLDAWLAARDGEADIIIGTRSALFTPMKN 317

Query: 283 LKLIVVDEEHDPSYKQQEGARYSARDLAVWRGQREGAKVILGSATPSFESWHQSRPAEGD 342
             LI++DEEHD SYKQQEG RY ARDLA+ R  +E   ++LGSATPS E+ H +      
Sbjct: 318 PGLIIIDEEHDGSYKQQEGLRYHARDLALVRAHQENIPILLGSATPSLETLHNALT---- 373

Query: 343 DPGGRYVRLAMPSRIGAGELPAVRLVDMNLQPPKTVISGALLDAIGQRIARGEQSMIFLN 402
              GRY  L M  R G    P +  +D+   P  + ISG L  AI Q +  G+Q ++FLN
Sbjct: 374 ---GRYRLLRMNQRAGGARPPRMLRLDVKSLPLDSGISGPLQQAIRQTLEAGQQVLVFLN 430

Query: 403 RRGYAPVLACGDCGWKSECPHCSAYRVFHKIDRTLRCHHCGFTERVPRACPACGNPDIAP 462
           RRG+AP L C DCGW SECP C A    H+    LRCHHCG+ ER+P  CP C + D+ P
Sbjct: 431 RRGFAPTLLCHDCGWLSECPRCDARMTVHQRSGVLRCHHCGYDERLPHQCPQCNHVDLRP 490

Query: 463 VGRGTERLEEHLAELFAAVKRPDGGAVRIARIDADSTRKQGALESQLAAVHSGEVDVLVG 522
           VG GTER EE L  LF     PD     I R+D DST ++ A+ +  + +  G+  +LVG
Sbjct: 491 VGAGTERAEERLKVLF-----PD---YPILRVDRDSTARKDAMHNLFSTIQRGQPSILVG 542

Query: 523 TQMIAKGHDFRRITLVAAVNPDGALFSSDFRAPERLFSLLMQSAGRAGRDAAYLASQGAT 582
           TQM+AKGH F R+TLVA ++ DG LFS DFRA ER+  L++Q AGRAGR           
Sbjct: 543 TQMLAKGHHFPRVTLVAILDADGGLFSGDFRASERMAQLIVQVAGRAGR-------AEEP 595

Query: 583 AEMWIQTHHAQHPLFMALRQHDYAVFARQQLDERRAAGMPPFAFQALLRADAREQSVAQA 642
            ++ IQTH A HPL + L +  Y  FA Q LDERRAAG+PP++  ALLRA+A +   A+ 
Sbjct: 596 GKVIIQTHLADHPLLVQLTEQGYFAFAEQALDERRAAGLPPYSHLALLRAEAHKPGQAEG 655

Query: 643 FLNIAADQAE------ALPGADLVTRYPAVPLAIQRVANVERAQMLIESPSRAALQRLLA 696
           FL+ A   AE       LPG +L+     VP  ++R A   RAQ+LI++ +RA L RL++
Sbjct: 656 FLDEACAAAERLVAEQRLPGIELL---GPVPAPMERRAGRFRAQLLIQANTRAPLHRLIS 712

Query: 697 GWQPLLHELRRTPEGKGVIRWLVDVDP 723
            W  +L +L   P G+ V RW +DVDP
Sbjct: 713 AWLLVLEQL---PSGRQV-RWSLDVDP 735