Pairwise Alignments

Query, 726 a.a., Helicase PriA essential for oriC/DnaA-independent DNA replication from Variovorax sp. SCN45

Subject, 732 a.a., primosome assembly protein PriA (NCBI) from Escherichia coli BW25113

 Score =  430 bits (1106), Expect = e-124
 Identities = 284/707 (40%), Positives = 381/707 (53%), Gaps = 68/707 (9%)

Query: 30  WRLDIAVQTPAHAALGDLLSYASAGPLPPGTLVRVPLGKREVLGVVWNEPVSLEGAEPDM 89
           WRL +      H  +GD+L +A    LP    + +  G+      +W    + +G   D+
Sbjct: 78  WRLLLWAADYYHHPIGDVLFHA----LP----ILLRQGRPAANAPMWYWFATEQGQAVDL 129

Query: 90  -ALKPVGAALDALAPL--GEAWRDLVAF-----AGRYYQRSIGEIALAALPPQLRDLTTT 141
            +LK       ALA L  G+ WRD VA      A     R  G   LA+  P+  D  T 
Sbjct: 130 NSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTN 189

Query: 142 QLARRLKRKTTAGPVAETAESANLIALSAEQTAALERIEAASGTF---LLVGSTGSGKTE 198
                             A S   + L+ EQ  A+  I +A+ TF   LL G TGSGKTE
Sbjct: 190 Y-----------------AVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTE 232

Query: 199 VYLRCVADLLAREPEAQALVMVPEINLTPQLEARFKARFGEEAVVSLHSGMTNPQRLASW 258
           VYL  + ++LA+    QALVMVPEI LTPQ  ARF+ RF     V LHSG+ + +RL++W
Sbjct: 233 VYLSVLENVLAQGK--QALVMVPEIGLTPQTIARFRERFNAPVEV-LHSGLNDSERLSAW 289

Query: 259 LAAHSGGARIVLGTRMAVFASIPGLKLIVVDEEHDPSYKQQEGARYSARDLAVWRGQREG 318
           L A +G A IV+GTR A+F     L +IV+DEEHD SYKQQEG RY ARDLAV+R   E 
Sbjct: 290 LKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQ 349

Query: 319 AKVILGSATPSFESWHQSRPAEGDDPGGRYVRLAMPSRIGAGELPAVRLVDMNLQPPKTV 378
             +ILGSATP+ E+    +         +Y  L +  R G        ++D+  Q  +  
Sbjct: 350 IPIILGSATPALETLCNVQQK-------KYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG 402

Query: 379 ISGALLDAIGQRIARGEQSMIFLNRRGYAPVLACGDCGWKSECPHCSAYRVFHKIDRTLR 438
           ++ AL+  + Q +    Q ++FLNRRG+AP L C DCGW +ECP C  Y   H+    LR
Sbjct: 403 LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLR 462

Query: 439 CHHCGFTERVPRACPACGNPDIAPVGRGTERLEEHLAELFAAVKRPDGGAVRIARIDADS 498
           CHHC     VPR CP+CG+  + PVG GTE+LE+ LA LF  V         I+RID D+
Sbjct: 463 CHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVP--------ISRIDRDT 514

Query: 499 TRKQGALESQLAAVHSGEVDVLVGTQMIAKGHDFRRITLVAAVNPDGALFSSDFRAPERL 558
           T ++GALE QLA VH G   +L+GTQM+AKGH F  +TLVA ++ DGALFS+DFR+ ER 
Sbjct: 515 TSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERF 574

Query: 559 FSLLMQSAGRAGRDAAYLASQGATAEMWIQTHHAQHPLFMALRQHDYAVFARQQLDERRA 618
             L  Q AGRAGR        G   E+ +QTHH +HPL   L    Y  FA Q L ERR 
Sbjct: 575 AQLYTQVAGRAGR-------AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRM 627

Query: 619 AGMPPFAFQALLRADAREQSVAQAFLNIAADQAEALPGAD--LVTRYPAVPLAIQRVANV 676
             +PP+    ++RA+      A  FL    +   + P AD  L    P   LA +R    
Sbjct: 628 MQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKR-GGR 686

Query: 677 ERAQMLIESPSRAALQRLLAGWQPLLHELRRTPEGKGVIRWLVDVDP 723
            R Q+L++ PSR  LQ ++ G   L++ +   P+ + V +W++DVDP
Sbjct: 687 WRWQILLQHPSRVRLQHIINGTLALINTI---PDSRKV-KWVLDVDP 729