Pairwise Alignments

Query, 289 a.a., Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  119 bits (297), Expect = 1e-31
 Identities = 86/262 (32%), Positives = 134/262 (51%), Gaps = 15/262 (5%)

Query: 1   MEDYLPFVISGLGLGAVYALSGVGLVVLYRSSGVLNFAFGAIGAIGAYVAWSMLEADWPQ 60
           M  +   +I GL  G +Y+L  +G V++Y++SGV NFA GA+    A    S+LE   P 
Sbjct: 1   MAFFFEVLIGGLLAGVMYSLVAIGFVLIYKASGVFNFAQGAMVLFAALTFVSLLERGVPF 60

Query: 61  ALAWSAAIVTSMLLSLAYGRLLAPRLSHRDPTIRSIATLGFALVVVGFTEWYWGEQPRRL 120
            L++   + T + L+L   R +   L  R P    +ATLG A ++ G  +  WG Q   L
Sbjct: 61  WLSFLVTLATMIALALLIERAVLRPLVGRSPITLFMATLGLAYIIEGAAQALWGAQVHGL 120

Query: 121 VL-----PTDAGAIDFVLGEVEVRLTHTRALGLTLAVLMMGGVGLLLSKTRVGLKMRALA 175
            L     P + G +  +L + ++    T A    L VL+     LL ++TR+GL +RA+A
Sbjct: 121 ELAISDAPLELGGL--LLSQFDLFAAATAA---ALVVLL----SLLFNRTRIGLALRAVA 171

Query: 176 NDRDLSALLGIRVLGVDTVAWVLSGAFAGVCGLLLANIVRLQATLLTFLVIPAFAAAIIG 235
           +D   +  +GIR+  V  V W ++G    V GLL    + +Q + L+ +V+ A    IIG
Sbjct: 172 DDPRAAMSVGIRLPRVWAVVWAVAGFVGLVAGLLWGARLGVQFS-LSLVVLKALPVLIIG 230

Query: 236 RLHSLPATVAGGIAIGVLEALA 257
              S+   + GG+ IG  E LA
Sbjct: 231 GFTSISGAIVGGLIIGASEKLA 252