Pairwise Alignments

Query, 289 a.a., Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  110 bits (274), Expect = 5e-29
 Identities = 73/253 (28%), Positives = 129/253 (50%), Gaps = 3/253 (1%)

Query: 4   YLPFVISGLGLGAVYALSGVGLVVLYRSSGVLNFAFGAIGAIGAYVAWSMLEADWPQALA 63
           YL  +++GLGLG +Y L  VGL +++     +NFA GA   +GAY+ ++ +       LA
Sbjct: 5   YLFQLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTGNFWLA 64

Query: 64  WSAAIVTSMLLSLAYGRLLAPRLSHRDPTIRSIATLGFALVVVGFTEWYWGEQPRRLVLP 123
              A +    L+ A  RLL  R+ H   T + + TLG AL++   +   WG   + + +P
Sbjct: 65  LLIAPLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGPVGKNIAVP 124

Query: 124 TDAGAIDFVLGEVEVRLTHTRALGLTLAVLMMGGVGLLLSKTRVGLKMRALANDRDLSAL 183
            +   +  +LG  +    + R   +  A L+  G+ LLL +TR G  +RA +   +  +L
Sbjct: 125 PELRGV-LILG--DFIYPYYRLFLIGFAALIGIGLWLLLERTRFGALVRAGSESTETVSL 181

Query: 184 LGIRVLGVDTVAWVLSGAFAGVCGLLLANIVRLQATLLTFLVIPAFAAAIIGRLHSLPAT 243
           LG  +  + ++ + L    AGV G+L A +   Q  +   ++  AF   +IG + S    
Sbjct: 182 LGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGIAFVVVVIGGMGSFGGA 241

Query: 244 VAGGIAIGVLEAL 256
           + GG+ +GV++++
Sbjct: 242 LVGGLLVGVVQSM 254