Pairwise Alignments

Query, 357 a.a., FIG00452956: hypothetical protein from Variovorax sp. SCN45

Subject, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  112 bits (281), Expect = 1e-29
 Identities = 86/315 (27%), Positives = 144/315 (45%), Gaps = 20/315 (6%)

Query: 36  MVGSVLLIGLVVPWLANAYWIKTLTSSLALSIAAAGVALLYGQLGLVSLCQYALLGAGGW 95
           ++ ++++I +V P  AN Y +  +   L   +   G+ ++ G  GL+ L   A    G +
Sbjct: 98  IIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAY 157

Query: 96  IALRAGHGLGWPFELSVLAGGLLSCVVGMLAGLPALRLKGLYLALVTMMMAGGFQVVIN- 154
                   LG  F   +    + + + G + G P LR+ G YLA+VT+      ++V+N 
Sbjct: 158 GLALGYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNN 217

Query: 155 ---VTGFPDG----GAGWLGRVFGSERLMMPRPALALTDAAY-------FRYVAVWLAVV 200
               TG P+G       +LG  FG        P        Y       F Y+ ++L V+
Sbjct: 218 WLSFTGGPNGMPVPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLVVL 277

Query: 201 LVLIELHRRTR--AGRSWALIRRGEAAAVAAGVNILRYQTWAFGLAGFCAGVAGALLAGG 258
            VL   HR TR   GR+W  +R  E A  + G+N +  +  AF +    AG+AG   A  
Sbjct: 278 AVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASY 337

Query: 259 VGQLDGRAFTAGDSVMLFALTVVGGVYHWAGALIAGLLLRAVPALLTDFGVNGYLAMIFF 318
            G ++  +FT  +S ++ A+ V+GG+    G +IA  +L   P LL  F       ++ F
Sbjct: 338 QGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSF---SEYRVLLF 394

Query: 319 GLALLHALITAPSGI 333
           G+ ++  +I  P G+
Sbjct: 395 GVLMVVMMIWRPRGL 409