Pairwise Alignments

Query, 357 a.a., FIG00452956: hypothetical protein from Variovorax sp. SCN45

Subject, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

 Score =  109 bits (273), Expect = 1e-28
 Identities = 86/318 (27%), Positives = 143/318 (44%), Gaps = 20/318 (6%)

Query: 33  LAVMVGSVLLIGLVVPWLANAYWIKTLTSSLALSIAAAGVALLYGQLGLVSLCQYALLGA 92
           L  ++ ++++I +V P  AN Y +  +   L   +   G+ ++ G  GL+ L   A    
Sbjct: 105 LRYIIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAI 164

Query: 93  GGWIALRAGHGLGWPFELSVLAGGLLSCVVGMLAGLPALRLKGLYLALVTMMMAGGFQVV 152
           G +        LG  F   +    + + + G + G P LR+ G YLA+VT+      ++V
Sbjct: 165 GAYGLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLV 224

Query: 153 IN----VTGFPDG----GAGWLGRVFGSERLMMPRPALALTDAAY-------FRYVAVWL 197
           +N     TG P+G       + G  FG        P        Y       F Y  +++
Sbjct: 225 LNNWLSFTGGPNGMPAPSPTFFGLEFGRRAKDGGVPIHEFFGFEYNASLKFVFIYAVLFM 284

Query: 198 AVVLVLIELHRRTR--AGRSWALIRRGEAAAVAAGVNILRYQTWAFGLAGFCAGVAGALL 255
            V+ VL   HR TR   GR+W  +R  E A  + G+N +  +  AF L    AG+AG   
Sbjct: 285 VVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFF 344

Query: 256 AGGVGQLDGRAFTAGDSVMLFALTVVGGVYHWAGALIAGLLLRAVPALLTDFGVNGYLAM 315
           A   G ++  +FT  +S ++ A+ V+GG+    G +IA  +L   P LL  F       +
Sbjct: 345 ATYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSF---SEYRV 401

Query: 316 IFFGLALLHALITAPSGI 333
           + FG+ ++  +I  P G+
Sbjct: 402 LLFGVLMVLMMIWRPRGL 419