Pairwise Alignments

Query, 357 a.a., FIG00452956: hypothetical protein from Variovorax sp. SCN45

Subject, 364 a.a., ABC transporter membrane spanning protein (branched chain amino acid) from Agrobacterium fabrum C58

 Score =  109 bits (272), Expect = 1e-28
 Identities = 99/343 (28%), Positives = 160/343 (46%), Gaps = 36/343 (10%)

Query: 32  SLAVMVGSVLLIG---LVVPWLANAYWIKT-LTSSLALSIAAAGVALLYGQLGLVSLCQY 87
           SL    G+V+++    LVVP++  +Y  +  L   LALS+A  G+ LL G  G VSL   
Sbjct: 13  SLPRRAGTVVVLAIAYLVVPFVGTSYLFEAILLPFLALSLAGVGLNLLTGYAGQVSLGSA 72

Query: 88  ALLGAGGWIALRAGHGL-GWPFELSVLAGGLLSCVVGMLAGLPALRLKGLYLALVTMMMA 146
           A +  G + A      + G P  +S++  GL + ++G++ GLP+LRL+G YLA+ T  +A
Sbjct: 73  AFMAVGAFAAYNFDLRVDGLPLTVSIVLAGLSAAIIGIVFGLPSLRLRGFYLAVST--LA 130

Query: 147 GGFQVVINVTGFPDGGAGWLGRVFGSERLMMPRPALALTDAAY----FRYVAVWLAVVLV 202
             F V   +T F      WL     S   ++  PAL+L   ++     RY+     V  +
Sbjct: 131 AQFFVQWALTKF-----SWLSNESASG--VIDAPALSLAGISFEGPVGRYLFALTTVTAL 183

Query: 203 LIELHR--RTRAGRSWALIRRGEAAAVAAGVNILRYQTWAFGLAGFCAGVAGALLA-GGV 259
               +R   ++ GR++  +R  E AA   GV +LR +  AF ++ F  GVAG + A   +
Sbjct: 184 TFLAYRLVSSQTGRNFIAVRDNETAARIIGVPVLRTKLLAFAISSFIIGVAGVIWAFAYL 243

Query: 260 GQLDGRAFTAGDSVMLFALTVVGGVYHWAGALIAGLLLRAVPALLT-----------DFG 308
             ++   F    S  +  + ++GG+    GA     L+   P +L+           D G
Sbjct: 244 RTVEPAGFNLDRSFQILFIVIIGGLASIRGAFFGAALIVVFPLVLSRLGSLLLGDVFDSG 303

Query: 309 VNGYLAMIFFGLALLHALITAPSGIAGQLAGLVESVRKRLPGA 351
           V      I  G  ++  LI  P G    L  L + ++ R+  A
Sbjct: 304 VLDMTQRIVIGALIILFLILEPDG----LVSLWDRLKSRIAAA 342