Pairwise Alignments

Query, 411 a.a., Multidrug efflux system MdtABC-TolC, membrane fusion component MdtA from Variovorax sp. SCN45

Subject, 430 a.a., efflux RND transporter periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  292 bits (747), Expect = 1e-83
 Identities = 168/387 (43%), Positives = 231/387 (59%), Gaps = 7/387 (1%)

Query: 13  HPLFQRRSTWLAAATLVVLLGGGAWALTQQSAHAAKPEAAQAPPPVQVTTVRVKQQEVQT 72
           +P++++R+T          L    W   Q +    +P      P V VT   V ++++  
Sbjct: 33  NPVWRKRATLAGGLAAAAGLAFALWPTPQPAKTGGRPGGPDGRPVV-VTVTSVARRDMPI 91

Query: 73  YRSGIGTVASMATVTVKARIDGQLDKVGFVEGQDVKAGQMLAQLDPRTLQAQLAQAQATR 132
           Y   IGTV +  TVTV++R+DG+L +V F EGQDV AG +LAQ+DPRT +AQ  QA ATR
Sbjct: 92  YLDAIGTVQAYNTVTVRSRVDGELVEVLFKEGQDVHAGDVLAQIDPRTYRAQYEQALATR 151

Query: 133 AKDQATLVNARADLKRYTTLIAQDAATQQQLDTQKALVNQLEATVQNDAAQVQYAEVQLS 192
            KD A L  A+ DL RY +L   D  + Q +DTQ+ALV QLEATV+ D A    A+  LS
Sbjct: 152 DKDSAQLEAAKRDLARYVSL--GDRVSGQSVDTQRALVRQLEATVRADEASASNAKTMLS 209

Query: 193 FTRISSPMDGRVGARLVDPGNIVHAADTNGLVVINQIDPIAVQFTLPEDAVQDINRLQQK 252
           +T I++P+DGR G RLVD GNIV A+D  GLV + Q+ PI+V FTLP+ ++  +N  Q +
Sbjct: 210 YTVIAAPIDGRTGMRLVDRGNIVRASDATGLVTLTQVQPISVVFTLPQQSLAAVNE-QLR 268

Query: 253 SSQPLSVVAYDRSGAQMLGTGKLILLNNQIDTTSGTVQLKGSFANPQHALWPGQYVNVRL 312
               L+V A       +  TG+L L++NQID T+GT++LK    N +  LWPG +VNVRL
Sbjct: 269 LDGKLAVQALRPETRALADTGELELVDNQIDQTTGTIKLKAVMPNAERKLWPGGFVNVRL 328

Query: 313 QLERRPDSLTVPAAAVQRGQDNTYVWVVDDENKVSNVPVHVVQIADGTAVIDKGLSVNQR 372
            L  R D L VPA AVQRG    YV+ V ++  V    V V  +  G A++D+GL+    
Sbjct: 329 LLSTRKDGLVVPAQAVQRGPQGPYVFAVKEDRTVEMRAVKVATVEAGQALVDEGLAEGDT 388

Query: 373 VVVDGQYKLKPGSTVIEPPPAQKAGAG 399
           VVV+G  KL+PG+ +       KAG G
Sbjct: 389 VVVEGTAKLQPGARI---STGDKAGEG 412