Pairwise Alignments

Query, 497 a.a., Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system from Variovorax sp. SCN45

Subject, 485 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score =  205 bits (521), Expect = 3e-57
 Identities = 148/487 (30%), Positives = 231/487 (47%), Gaps = 25/487 (5%)

Query: 9   LSRAALALAV--LLLAGCAVGPDYVRPQMEVPAAFKETGGPWKTAAPQTIDADHPWWDAY 66
           +S++ L+LAV   +L+GC++ PDY RP+  V A F +        AP    A+  W   +
Sbjct: 1   MSKSLLSLAVTAFVLSGCSLIPDYQRPEAPVAAQFPQGPAYSSAQAPSQAAAEQGWKQFF 60

Query: 67  GDSTLGDLMAKANAANQNIRVAEAQYRQAQAITAAARANFFPTVGVNAGAVRGQS----N 122
            D  L  L+  A   N+++RVA        A     RA+ FP V       R ++    +
Sbjct: 61  HDPALQQLIQTALVNNRDLRVAALNIDAYAAQYQIQRADLFPAVSATGSGSRSRTPARLS 120

Query: 123 STGTVKLGTTDTLGLS-ASWEPDLWGAVRRSVEAGTASEQASADDLAGARLSIQTTLAQD 181
            TG   + +  + GL  +S+E DL+G VR   E       A+ +     ++S+  ++A  
Sbjct: 121 QTGESTISSQYSAGLGISSYELDLFGRVRSLSEEALQKYFATEEARRSTQISLVASVANA 180

Query: 182 YLQIRVIDLERDLYASTTTAYAKALELTQHQYAAGTVLRSDVALAESQLKTAQAQAVDLD 241
           YL  +       L   T  AY ++ +LT      G     D++ + + ++ A+       
Sbjct: 181 YLTWQADKELLKLTQDTLDAYEQSFKLTSRSNEVGVASALDLSQSRTSVENARVALARYT 240

Query: 242 AQRAQLEHAIAVLTGQA-PASFSLPPLESSGQPQTPESLSLASALHVQLPVSPAGLPSEL 300
            Q AQ E+++ +L G   PA+ +  PL                     L   PAGLPS+L
Sbjct: 241 RQVAQDENSLTLLLGTGLPANITSKPLSDD-----------------LLSEVPAGLPSDL 283

Query: 301 LERRPDIAGAERRVQAANANIGVAKAAYYPQIMLSASGGFSAASLATLFNTPSRVWSLGA 360
           L+RRPDI  AE  ++AANANIG A+AA++P I L+AS G ++ +L  LF   S  WS   
Sbjct: 284 LQRRPDIVQAEYNLKAANANIGAARAAFFPSITLTASAGTASPNLGGLFKGGSGTWSFAP 343

Query: 361 ALAQTVFDGGLRKAHTDQAVAAYDASVAQYKQTVLGGFQQVEDNLATLRVLDGESTLQAD 420
            +   +F+ G  +A  D +    + +VA Y++ +  GFQ+V D LA       +   Q  
Sbjct: 344 QINIPIFNAGSLRASLDYSKIQKEINVANYEKAIQTGFQEVSDGLAARETYKQQLDAQRG 403

Query: 421 AVRASQLAERLALAQYRAGTATYLSVVTAQTLSLTNQRTAAQVLGRQLAASVSLISATGG 480
            V A+Q   RLA  +YR G  + L+ + AQ    + Q++       QL + V+L  A GG
Sbjct: 404 FVAANQDYYRLAERRYRIGVDSNLTFLDAQRQLFSAQQSLITDRLAQLTSEVNLYKALGG 463

Query: 481 GWNAADA 487
           GWN   A
Sbjct: 464 GWNEQTA 470