Pairwise Alignments

Query, 497 a.a., Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system from Variovorax sp. SCN45

Subject, 536 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

 Score =  229 bits (584), Expect = 2e-64
 Identities = 159/501 (31%), Positives = 241/501 (48%), Gaps = 49/501 (9%)

Query: 8   PLSRAALALAVLLLAGCAVGPDYVRPQMEVPAAFKETGGPWKTAAP---QTIDADHP--- 61
           P+  A L  A LLL+ CAVGPD+  P  E+PAA +    P  T AP   +T+ A+ P   
Sbjct: 28  PVQGAVLGTA-LLLSACAVGPDFKTP--ELPAAAQ---APDYTPAPMPSRTVQAEGPAGQ 81

Query: 62  -------------WWDAYGDSTLGDLMAKANAANQNIRVAEAQYRQAQAITAAARANFFP 108
                        WWD +    L  L+  + A +  +  A+A  RQA+A   A   N +P
Sbjct: 82  AQELVAGRDIPAQWWDVFRSEPLDQLIRASLAQSPTLASAQAALRQAEATYEAKTGNLWP 141

Query: 109 TVGVNAGAVRGQSNSTGTVKLG----TTDTLGLSASWEPDLWGAVRRSVEAGTASEQASA 164
            V    G  R +++   T   G    T     ++ S+  D++G  RR +E   A+     
Sbjct: 142 QVSAQLGVQRERASEISTQVPGGQLLTLYNASVNVSYNLDVFGGTRRQIEGAQAAVDTQR 201

Query: 165 DDLAGARLSIQTTLAQDYLQIRVIDLERDLYASTTTAYAKALELTQHQYAAGTVLRSDVA 224
             +    L++ + L    ++   +  +         A  + L + + Q+  G + +S V 
Sbjct: 202 YQVEAVYLTLTSNLVTTAIREASLRAQLQATREVLQAQTEQLNVIEKQFDTGAIPKSIVL 261

Query: 225 LAESQLKTAQAQAVDLDAQRAQLEHAIAVLTGQAPASFSLPPLESSGQPQTPESLSLASA 284
              +Q+   QA    ++   AQ  H +AV  G+ P+   LP  + +       SLSL  A
Sbjct: 262 QQRTQVAQTQATLPPIEKALAQTRHQLAVFAGRLPSEAGLPEFDLA-------SLSLPQA 314

Query: 285 LHVQLPVSPAGLPSELLERRPDIAGAERRVQAANANIGVAKAAYYPQIMLSASGGFSAAS 344
           L       P  LPSEL  +RPD+  +E ++  A+A +GVA A  YPQI LSAS G +A  
Sbjct: 315 L-------PLSLPSELARQRPDVRASEAQLHQASAAVGVATANLYPQIQLSASYGNNALR 367

Query: 345 LATLFNTPSRVWSLGAALAQTVFDGGLRKAHTDQAVAAYDASVAQYKQTVLGGFQQVEDN 404
              LF  P+ +W++GA L Q +F+GG  +A    AVAAYD++ AQY+ TVLG FQ V D 
Sbjct: 368 ARDLFTGPTTLWNIGAGLTQPIFNGGALRAQQRAAVAAYDSAAAQYRNTVLGAFQNVAD- 426

Query: 405 LATLRVLDGESTLQADAVRASQLAER---LALAQYRAGTATYLSVVTAQTLSLTNQRTAA 461
              LR L+ ++    +   A  LA +   L+ AQ+RAG  +Y++++TAQ   L       
Sbjct: 427 --ALRALELDAIALQNQAAAESLARQSLDLSTAQFRAGAVSYVTLLTAQQAWLQTHTALV 484

Query: 462 QVLGRQLAASVSLISATGGGW 482
           Q    + A + +L  A GGGW
Sbjct: 485 QAQAARYADTAALFQALGGGW 505