Pairwise Alignments

Query, 497 a.a., Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system from Variovorax sp. SCN45

Subject, 496 a.a., RND efflux transporter, outer membrane protein from Pseudomonas putida KT2440

 Score =  384 bits (986), Expect = e-111
 Identities = 218/483 (45%), Positives = 303/483 (62%), Gaps = 26/483 (5%)

Query: 16  LAVLLLAGCAVGPDYVRPQMEVPAA-FKETGGPWKTAAPQTIDADHPWWDAYGDSTLGDL 74
           L V LL+ C + PDY RP++   AA FK   G W  A+P    A   WW+ YGD+ L  L
Sbjct: 28  LCVALLSACTLSPDYHRPELNSTAAQFKHAEG-WTQASPSDAIARGAWWEIYGDAGLNAL 86

Query: 75  MAKANAANQNIRVAEAQYRQAQAITAAARANFFPTVGVNAG---AVRGQSNSTGTVK--- 128
           + + N +NQ +  +EAQYRQAQA+  ++RA  FP++ ++     + +G  +S+ ++    
Sbjct: 87  VEELNRSNQTVAQSEAQYRQAQALVRSSRAALFPSLDLSTSKNRSAQGTGSSSSSLSNNS 146

Query: 129 --LGTTDTLGLSASWEPDLWGAVRRSVEAGTASEQASADDLAGARLSIQTTLAQDYLQIR 186
             +  T    L  SWE DLWG +R ++ A  AS +AS  DLA  RLS Q+ L Q+YLQ+R
Sbjct: 147 SGIRNTYNAQLGVSWEIDLWGKLRETLNANEASAEASFADLASIRLSQQSELVQNYLQLR 206

Query: 187 VIDLERDLYASTTTAYAKALELTQHQYAAGTVLRSDVALAESQLKTAQAQAVDLDAQRAQ 246
           VID ++ L  +T  AY ++L + ++QY AG      VA A +QLK+ QA  +DL  QRAQ
Sbjct: 207 VIDEQKRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQLKSTQADLIDLIWQRAQ 266

Query: 247 LEHAIAVLTGQAPASFSLPPLESSGQPQTPESLSLASALHVQLPVSPAGLPSELLERRPD 306
            E+AIAVL G+APA F+L   +S   P  P           Q+PVS   LPS+LLERRPD
Sbjct: 267 FENAIAVLLGKAPADFALA--DSKAIPALP-----------QIPVS---LPSQLLERRPD 310

Query: 307 IAGAERRVQAANANIGVAKAAYYPQIMLSASGGFSAASLATLFNTPSRVWSLGAALAQTV 366
           IA AER V AANANIGV++AAY+P + LS SGG+S++S +     P+R WS+G  LA T+
Sbjct: 311 IAAAERNVMAANANIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQLALTL 370

Query: 367 FDGGLRKAHTDQAVAAYDASVAQYKQTVLGGFQQVEDNLATLRVLDGESTLQADAVRASQ 426
           FD G R A  D+ VA YD +VAQY+QTVL GF++VE+ L  L+V   E+ ++ +A+ A++
Sbjct: 371 FDAGKRSAEVDRTVAVYDQTVAQYRQTVLDGFREVENLLVQLKVYGDEAVVRQEALDAAR 430

Query: 427 LAERLALAQYRAGTATYLSVVTAQTLSLTNQRTAAQVLGRQLAASVSLISATGGGWNAAD 486
            + RL   QYRAG   YL VV  QT +L+N+R+   +L  +L ASV L++A GGGW+A  
Sbjct: 431 ESLRLTENQYRAGLIGYLDVVNVQTTALSNERSVLNLLQGRLVASVQLVAALGGGWDAEQ 490

Query: 487 AVA 489
           A A
Sbjct: 491 AFA 493