Pairwise Alignments

Query, 497 a.a., Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system from Variovorax sp. SCN45

Subject, 471 a.a., Multidrug efflux RND outer membrane protein OprN from Pseudomonas putida KT2440

 Score =  202 bits (513), Expect = 3e-56
 Identities = 154/488 (31%), Positives = 235/488 (48%), Gaps = 27/488 (5%)

Query: 8   PLSRAALALAVLLLAGCAVGPDYVRPQMEVPAAFKETGGPWKTAAPQTIDADHPWWDAYG 67
           PL+ + LALA   LA CAVGPDY  P  E PA   +     +  A      +  WW  + 
Sbjct: 6   PLTPSLLALA---LAACAVGPDYQAPATE-PA---QLSSDVQAKAYDRSRFESLWWKQFD 58

Query: 68  DSTLGDLMAKANAANQNIRVAEAQYRQAQAITAAARANFFPTVGVNAGAVRGQSNSTGTV 127
           D  L  L+  +   N+++RVA A+ + A++I   A  + FP V   A +  G+    G  
Sbjct: 59  DPVLNQLVQASLDGNRDLRVAFARLKSARSIREDAENDPFPVVTSRASSDLGKGQIPGQT 118

Query: 128 KLGTTDT---LGLSASWEPDLWGAVRRSVEAGTASEQASADDLAGARLSIQTTLAQDYLQ 184
                     LGL  +WE DL+G ++R +EA  A E  +A DL   ++S+   L   Y Q
Sbjct: 119 TERVNSERYDLGLDMAWELDLFGRIQRQIEASEAQEAVAAADLQQLQVSLIAELVDAYGQ 178

Query: 185 IRVIDLERDLYASTTTAYAKALELTQHQYAAGTVLRSDVALAESQLKTAQAQAVDLDAQR 244
           +R   L   +  +      ++  +T+    AG     DV  A+++L   +A    L A++
Sbjct: 179 LRGAQLREKIALANLKTQQESRTITETLRDAGVGNDLDVVRADARLAGVEATVPQLQAEQ 238

Query: 245 AQLEHAIAVLTGQAPASFSLPPLESSGQPQTPESL-SLASALHVQLPVSPAGLPSELLER 303
           A+  H IA L GQ P + S+          +P++L ++A AL       P G P ELL R
Sbjct: 239 ARARHRIATLLGQRPDALSVD--------LSPKALPAIAKAL-------PVGDPGELLRR 283

Query: 304 RPDIAGAERRVQAANANIGVAKAAYYPQIMLSASGGFSAASLATLFNTPSRVWSLGAALA 363
           RPDI  AER++ AA AN+GVA A  +P++ LS   GF+AA  + + ++ +  W+LG ++ 
Sbjct: 284 RPDIRSAERQLAAATANVGVATADLFPRVSLSGFLGFTAARGSQIGSSAANAWALGPSIT 343

Query: 364 QTVFDGGLRKAHTDQAVAAYDASVAQYKQTVLGGFQQVEDNLATLRVLDGESTLQADAVR 423
              FD G  +A    A A  + ++A Y+Q VL   ++  +  +                 
Sbjct: 344 WAAFDLGSVRARLRGAKADAEGALANYEQQVLLALEESANAFSDYDKTQQRLLSLMRQSD 403

Query: 424 ASQLAERLALAQYRAGTATYLSVVTAQTLSLTNQRTAAQVLGRQLAASVSLISATGGGWN 483
           AS+ A  LA  +YR GT  YL ++ A+   L+ +   AQ         VS+  A GGGW 
Sbjct: 404 ASRKAAELASIRYREGTVDYLVLLDAERERLSAEDAQAQGEVDLYRGIVSIYKALGGGWQ 463

Query: 484 AADAVASA 491
             + VASA
Sbjct: 464 -PETVASA 470