Pairwise Alignments

Query, 497 a.a., Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system from Variovorax sp. SCN45

Subject, 484 a.a., Probable efflux pump outer membrane protein TtgC from Pseudomonas putida KT2440

 Score =  190 bits (483), Expect = 8e-53
 Identities = 140/479 (29%), Positives = 223/479 (46%), Gaps = 22/479 (4%)

Query: 10  SRAALALAVLLLAGCAVGPDYVRPQMEVPAAFKETGGPWKTAAPQTIDADHPWWDAYGDS 69
           S  +LA+   +L GC++ PDY  P+  V A + +      T +     A+  W   + D 
Sbjct: 4   SLLSLAVTAFILGGCSLIPDYQTPEAPVAAQWPQGPAYSPTQSADVAAAEQGWRQFFHDP 63

Query: 70  TLGDLMAKANAANQNIRVAEAQYRQAQAITAAARANFFPTVGVNAGAVRGQ--SNSTGTV 127
            L  L+  +   N+++RVA       +A     RA+ FP V       R +  +N + T 
Sbjct: 64  ALQQLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANMSQTG 123

Query: 128 KLGTTD----TLGLSASWEPDLWGAVRRSVEAGTASEQASADDLAGARLSIQTTLAQDYL 183
           + G T     TLG+SA +E DL+G VR   E    +  +S       ++++  ++A  Y 
Sbjct: 124 ESGITSQYSATLGVSA-YELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVANAYY 182

Query: 184 QIRVIDLERDLYASTTTAYAKALELTQHQYAAGTVLRSDVALAESQLKTAQAQAVDLDAQ 243
             +       L   T   Y ++  LT+     G     DV+ A + ++ A+ +       
Sbjct: 183 TWQADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQYQRL 242

Query: 244 RAQLEHAIAVLTGQAPASFSLPPLESSGQPQTPESLSLASALHVQLPVSPAGLPSELLER 303
            AQ  +++ VL G    +    PLE                   QL   PAGLPS++L+R
Sbjct: 243 VAQDVNSLTVLLGTGIPADLAKPLELDAD---------------QLAEVPAGLPSDILQR 287

Query: 304 RPDIAGAERRVQAANANIGVAKAAYYPQIMLSASGGFSAASLATLFNTPSRVWSLGAALA 363
           RPDI  AE  ++AANANIG A+AA++P I L+A+ G  +  +  LF+     W     + 
Sbjct: 288 RPDIQEAEHLLKAANANIGAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQIN 347

Query: 364 QTVFDGGLRKAHTDQAVAAYDASVAQYKQTVLGGFQQVEDNLATLRVLDGESTLQADAVR 423
             +F+ G  KA  D +    D +VA+Y++T+   FQ+V D LA  +  + +   Q D V+
Sbjct: 348 LPIFNAGSLKASLDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQ 407

Query: 424 ASQLAERLALAQYRAGTATYLSVVTAQTLSLTNQRTAAQVLGRQLAASVSLISATGGGW 482
           A+Q   RLA  +YR G  + L+ + AQ    + Q+        QL + V+L  A GGGW
Sbjct: 408 ANQDYYRLAERRYRIGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGW 466