Pairwise Alignments

Query, 497 a.a., Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system from Variovorax sp. SCN45

Subject, 484 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

 Score =  245 bits (626), Expect = 2e-69
 Identities = 157/493 (31%), Positives = 244/493 (49%), Gaps = 32/493 (6%)

Query: 7   PPLSRAALALAVLLLAGCAVGPDYVRPQMEVPAAFKETGGPWKTAAPQTIDADHPWWDAY 66
           P L  + L LAVLL  GC +GPD+ RP  + P  +    G    + PQ    +  WW+ +
Sbjct: 3   PGLRLSPLLLAVLL-TGCTLGPDFQRPDSQAPQQWAPLQGEAAASQPQAEPLELRWWETF 61

Query: 67  GDSTLGDLMAKANAANQNIRVAEAQYRQAQAITAAARANFFPTVGVNAGAVRGQSNSTGT 126
            D+ L  L+ +    N ++++A A+  Q++A+ +   A+  P+V VNAG  R ++++ G 
Sbjct: 62  HDARLSALIQRVAERNLDLQMASARLLQSRALRSTLAADEVPSVDVNAGYSRARNSADGL 121

Query: 127 VKLGTTDTLG-------------LSASWEPDLWGAVRRSVEAGTASEQASADDLAGARLS 173
                +D  G             L A WE DLWG VRR VEA  A+ + + +D  G  L+
Sbjct: 122 -----SDPSGKAGKEAFNLWQGDLVAGWELDLWGRVRRQVEAADATVEVAENDRRGVLLA 176

Query: 174 IQTTLAQDYLQIRVIDLERDLYASTTTAYAKALELTQHQYAAGTVLRSDVALAESQLKTA 233
           + +  A +Y+Q+R +    D+          +L+L+Q + A G   R DVA A +Q+ + 
Sbjct: 177 LLSETAGNYIQLRAVQHTLDVTQDNLRVARHSLKLSQDRQAEGVATRLDVAQASAQVASI 236

Query: 234 QAQAVDLDAQRAQLEHAIAVLTGQAPASFSLPPLESSGQPQTPESLSLASALHVQLPVSP 293
           +++   L+AQR  L +A+++L  + P S     L+    P   +  ++            
Sbjct: 237 ESRLPSLEAQRDDLINALSLLAAEPPRSLQAELLQGGELPAPQQKFAI------------ 284

Query: 294 AGLPSELLERRPDIAGAERRVQAANANIGVAKAAYYPQIMLSASGGFSAASLATLFNTPS 353
            GLPSEL ERRPDI  AE R+ AA A+IGVAKA +YP I LS S GF A  L+      S
Sbjct: 285 -GLPSELAERRPDIRQAEARLHAATASIGVAKADFYPSIRLSGSVGFQALQLSDFGGWDS 343

Query: 354 RVWSLGAALAQTVFDGGLRKAHTDQAVAAYDASVAQYKQTVLGGFQQVEDNLATLRVLDG 413
           R ++ G  ++  +F+GG  K   +   A    +   Y++ VLG + +++D L        
Sbjct: 344 RRFAFGPQMSLPIFEGGRLKGTLELREAQQQEAALNYRKVVLGAWHEIDDVLRLYNASQL 403

Query: 414 ESTLQADAVRASQLAERLALAQYRAGTATYLSVVTAQTLSLTNQRTAAQVLGRQLAASVS 473
                A+AVR +++A   A  QY  G   +L+V+T Q   L ++            A V 
Sbjct: 404 RRDHLAEAVRQNRIALETAQRQYVEGAVDFLNVLTVQGALLASEEQWIDSSAAVSQALVG 463

Query: 474 LISATGGGWNAAD 486
           L  A GGGW A D
Sbjct: 464 LYKALGGGWQAFD 476



 Score = 41.6 bits (96), Expect = 6e-08
 Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 17/197 (8%)

Query: 84  NIRVAEAQYRQAQAITAAARANFFPTVGVNAGAVRGQSNSTGTVKLGTTDTLGLSA---S 140
           +IR AEA+   A A    A+A+F+P++ +        S S G   L  +D  G  +   +
Sbjct: 296 DIRQAEARLHAATASIGVAKADFYPSIRL--------SGSVGFQALQLSDFGGWDSRRFA 347

Query: 141 WEPDL------WGAVRRSVEAGTASEQASADDLAGARLSIQTTLAQDYLQIRVIDLERDL 194
           + P +       G ++ ++E   A +Q +A +     L     +           L RD 
Sbjct: 348 FGPQMSLPIFEGGRLKGTLELREAQQQEAALNYRKVVLGAWHEIDDVLRLYNASQLRRDH 407

Query: 195 YASTTTAYAKALELTQHQYAAGTVLRSDVALAESQLKTAQAQAVDLDAQRAQLEHAIAVL 254
            A        ALE  Q QY  G V   +V   +  L  ++ Q +D  A  +Q    +   
Sbjct: 408 LAEAVRQNRIALETAQRQYVEGAVDFLNVLTVQGALLASEEQWIDSSAAVSQALVGLYKA 467

Query: 255 TGQAPASFSLPPLESSG 271
            G    +F  PP  + G
Sbjct: 468 LGGGWQAFDEPPPNAHG 484