Pairwise Alignments

Query, 415 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 658 a.a., conserved exported protein of unknown function with YVTN beta-propeller repeat from Pseudomonas putida KT2440

 Score = 56.2 bits (134), Expect = 3e-12
 Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 13/253 (5%)

Query: 97  IDVGKGPQGLAMTADGKWLLVAVNGDDRVAFVDTSAHGVSATVPV-PKPHTIAIRPDGRQ 155
           I++   P   A T+D K + V++    +V+ +DT      A +    +P  +A++PD  +
Sbjct: 165 IELPGRPMDWAATSDDKQVFVSIPERGKVSVIDTETFTRVADLDAGDQPLRVALQPDQHR 224

Query: 156 AYVA--SQEPGHFAVVVIDMATRAVVTQIPLDKPPRDLEFDPDGKALYLTLAGVPAVQVL 213
            +V   S +P    V VID+  R+ +          ++ F  D +  Y++      + V+
Sbjct: 225 LWVGNNSSDPAKGGVTVIDVPGRSAMKHFNTGTGHHEIAFSADSRYAYVSNRDSGTLSVI 284

Query: 214 DATTNQWGAPVPTGVSPHIAQHFAGMASGVVVVPG-PGEVMLFDPAARTSVRSIGVGKQP 272
           D    +    +  G  P ++  ++ ++  V VV G  G V +FD  +     ++   +  
Sbjct: 285 DIPEMRLAKTIKVGPHP-LSVSYSALSQAVYVVDGEEGSVRVFDARSHQLRHTVQAEQGL 343

Query: 273 HWLDLSADGRKLWVSNEGSNDVSVVDLAGGAM-HTVAVGNAPRKIAVQRVAATTGAEHVG 331
             +  S DGR   V N   N   V+D +   + H + V   P ++       T G  +V 
Sbjct: 344 GPMRFSHDGRYGIVLNTLENQALVIDASTDKLIHHIPVAAEPYQLTF-----TKGYAYVR 398

Query: 332 G--SSHVTIRNFA 342
           G  S  V++ N A
Sbjct: 399 GLASPKVSMINLA 411



 Score = 52.4 bits (124), Expect = 4e-11
 Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 7/196 (3%)

Query: 41  VSVIDTASERVVATLPVAAGPDGIVLTPDGRSVFVSGSSA----SAVSEIDATSDRVTRA 96
           VSVIDT +   VA L     P  + L PD   ++V  +S+      V+ ID       + 
Sbjct: 193 VSVIDTETFTRVADLDAGDQPLRVALQPDQHRLWVGNNSSDPAKGGVTVIDVPGRSAMKH 252

Query: 97  IDVGKGPQGLAMTADGKWLLVAVNGDDRVAFVDTSAHGVSATVPV-PKPHTIAIRPDGRQ 155
            + G G   +A +AD ++  V+      ++ +D     ++ T+ V P P +++     + 
Sbjct: 253 FNTGTGHHEIAFSADSRYAYVSNRDSGTLSVIDIPEMRLAKTIKVGPHPLSVSYSALSQA 312

Query: 156 AYVASQEPGHFAVVVIDMATRAVVTQIPLDKPPRDLEFDPDGKALYLTLAGVPAVQVLDA 215
            YV   E G  +V V D  +  +   +  ++    + F  DG+   +         V+DA
Sbjct: 313 VYVVDGEEG--SVRVFDARSHQLRHTVQAEQGLGPMRFSHDGRYGIVLNTLENQALVIDA 370

Query: 216 TTNQWGAPVPTGVSPH 231
           +T++    +P    P+
Sbjct: 371 STDKLIHHIPVAAEPY 386



 Score = 49.3 bits (116), Expect = 3e-10
 Identities = 54/227 (23%), Positives = 89/227 (39%), Gaps = 8/227 (3%)

Query: 41  VSVIDTASERVVATLPVAAGPDGIVLTPDGRSVFVSGSSASAVSEIDATSDRVTRAIDVG 100
           V+VID      +       G   I  + D R  +VS   +  +S ID    R+ + I VG
Sbjct: 239 VTVIDVPGRSAMKHFNTGTGHHEIAFSADSRYAYVSNRDSGTLSVIDIPEMRLAKTIKVG 298

Query: 101 KGPQGLAMTADGKWLLVAVNGDDRVAFVDTSAHGVSATVPVPKP-HTIAIRPDGRQAYVA 159
             P  ++ +A  + + V    +  V   D  +H +  TV   +    +    DGR   V 
Sbjct: 299 PHPLSVSYSALSQAVYVVDGEEGSVRVFDARSHQLRHTVQAEQGLGPMRFSHDGRYGIVL 358

Query: 160 SQEPGHFAVVVIDMATRAVVTQIPLDKPPRDLEFDPDGKALYLTLAGVPAVQVLDATTNQ 219
           +        +VID +T  ++  IP+   P  L F   G A    LA      +  A+  +
Sbjct: 359 NTLENQ--ALVIDASTDKLIHHIPVAAEPYQLTF-TKGYAYVRGLASPKVSMINLASLGE 415

Query: 220 WGAPVPTGV-SPHIAQHFAG---MASGVVVVPGPGEVMLFDPAARTS 262
             +P+  G  +   A   AG   +A G+ V      V + +P   T+
Sbjct: 416 GRSPIVQGFEAGPAAPRQAGDLPLAQGLSVSRDDNSVFVVNPVDNTT 462



 Score = 45.8 bits (107), Expect = 4e-09
 Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 16/188 (8%)

Query: 177 AVVTQIPLDKPPRDLEFDPDGKALYLTLAGVPAVQVLDATT-------NQWGAPVPTGVS 229
           + + +I L   P D     D K +++++     V V+D  T       +    P+   + 
Sbjct: 160 STMARIELPGRPMDWAATSDDKQVFVSIPERGKVSVIDTETFTRVADLDAGDQPLRVALQ 219

Query: 230 PHIAQHFAGMASGVVVVPGPGEVMLFDPAARTSVRSIGVGKQPHWLDLSADGRKLWVSNE 289
           P   + + G  S     P  G V + D   R++++    G   H +  SAD R  +VSN 
Sbjct: 220 PDQHRLWVGNNSSD---PAKGGVTVIDVPGRSAMKHFNTGTGHHEIAFSADSRYAYVSNR 276

Query: 290 GSNDVSVVDLAGGAM-HTVAVGNAPRKIAVQRVAATTGAEHVGGSSHVTIRNFAFEPAQI 348
            S  +SV+D+    +  T+ VG  P  ++    +A + A +V      ++R F     Q+
Sbjct: 277 DSGTLSVIDIPEMRLAKTIKVGPHPLSVS---YSALSQAVYVVDGEEGSVRVFDARSHQL 333

Query: 349 --TVKAGQ 354
             TV+A Q
Sbjct: 334 RHTVQAEQ 341



 Score = 44.7 bits (104), Expect = 8e-09
 Identities = 27/111 (24%), Positives = 51/111 (45%)

Query: 31  AYVGNFKDSTVSVIDTASERVVATLPVAAGPDGIVLTPDGRSVFVSGSSASAVSEIDATS 90
           AYV N    T+SVID    R+  T+ V   P  +  +   ++V+V      +V   DA S
Sbjct: 271 AYVSNRDSGTLSVIDIPEMRLAKTIKVGPHPLSVSYSALSQAVYVVDGEEGSVRVFDARS 330

Query: 91  DRVTRAIDVGKGPQGLAMTADGKWLLVAVNGDDRVAFVDTSAHGVSATVPV 141
            ++   +   +G   +  + DG++ +V    +++   +D S   +   +PV
Sbjct: 331 HQLRHTVQAEQGLGPMRFSHDGRYGIVLNTLENQALVIDASTDKLIHHIPV 381



 Score = 32.0 bits (71), Expect = 6e-05
 Identities = 22/84 (26%), Positives = 37/84 (44%)

Query: 26  AAGPKAYVGNFKDSTVSVIDTASERVVATLPVAAGPDGIVLTPDGRSVFVSGSSASAVSE 85
           A     YV + ++ +V V D  S ++  T+    G   +  + DGR   V  +  +    
Sbjct: 308 ALSQAVYVVDGEEGSVRVFDARSHQLRHTVQAEQGLGPMRFSHDGRYGIVLNTLENQALV 367

Query: 86  IDATSDRVTRAIDVGKGPQGLAMT 109
           IDA++D++   I V   P  L  T
Sbjct: 368 IDASTDKLIHHIPVAAEPYQLTFT 391