Pairwise Alignments

Query, 515 a.a., Urea ABC transporter, permease protein UrtB from Variovorax sp. SCN45

Subject, 304 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

 Score =  125 bits (314), Expect = 2e-33
 Identities = 82/293 (27%), Positives = 149/293 (50%), Gaps = 8/293 (2%)

Query: 218 INAVFSGVSLGSVLLLAALGLAITYGLMGVINMAHGELMMIGAYATYVMQGIFQKYMPEA 277
           +  + +G++LGSV  L A+G  + YG++G+IN AHGE+ MI AY   +   +   Y    
Sbjct: 6   LQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLA-YFGIE 64

Query: 278 AFGWYLVAAIPVSFMASALVGAVLERGVIRFLYGRP-LETLLATWGISLMLQQLVRSLFG 336
           +F   ++  +  + + + + G V+ER   + L     L  L++  GISL+LQ   +   G
Sbjct: 65  SFPLLILGTLIFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQIAQG 124

Query: 337 AQNVGVENPGWMSGGFTM---LSNVTLPWNRICIIIFAALVLLAMGWLIGRTRLGLFVRG 393
           A+  G+  P  ++G + +      V L + ++ I++ A   +  + ++I  T+LG   R 
Sbjct: 125 AKQQGI--PTLLAGAWRVDIGSGFVQLTYTKVFILVAAFAGMALLTYVIKYTKLGRMCRA 182

Query: 394 VTQNRPIASCMGVNTARIDTYAFALGSGIAGLAGCALS-QIGNVGPDLGQSYIVDSFMVV 452
             Q+R +AS +G+NT R+ +Y F +G+ +A LAG  ++   G      G    + +F   
Sbjct: 183 TQQDRKMASILGINTDRVISYVFVIGAAMAALAGVLITLNYGTFDFYAGFIIGIKAFTAA 242

Query: 453 VMGGVGQLAGTVYAALGLGILNKFIEGWAGAVLAKIAVLVFIIIFIQKRPQGI 505
           V+GG+G L G +   + LGI      G   +    +     +++ +  RPQG+
Sbjct: 243 VLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVVILIFRPQGL 295