Pairwise Alignments

Query, 515 a.a., Urea ABC transporter, permease protein UrtB from Variovorax sp. SCN45

Subject, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

 Score =  123 bits (309), Expect = 8e-33
 Identities = 90/298 (30%), Positives = 154/298 (51%), Gaps = 18/298 (6%)

Query: 218 INAVFSGVSLGSVLLLAALGLAITYGLMGVINMAHGELMMIGAYATYVMQGIFQKYMPEA 277
           +  + +G++LGSV  L A+G  + YG++G+IN AHGE+ MI AY   +   +   Y    
Sbjct: 6   LQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLA-YFGVE 64

Query: 278 AFGWYLVAAIPVSFMASALVGAVLERGVIRFLYGRP-LETLLATWGISLMLQQLVRSLFG 336
           +F   ++  +  + + + + G  +ER   + L     L  L++  GISL+LQ   +   G
Sbjct: 65  SFPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQG 124

Query: 337 AQNVGVENPGWMSGGFTMLSN---VTLPWNRICIIIFAALVLLAMGWLIGRTRLGLFVRG 393
           A+  GV  P  + G   +      V L + +I I++ A + +  + ++I  T+LG   R 
Sbjct: 125 ARQQGV--PTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCRA 182

Query: 394 VTQNRPIASCMGVNTARIDTYAFALGSGIAGLAGCALSQIGNVGP-DLGQSYI--VDSFM 450
             Q+R +AS +G+NT R+ +Y F +G+ +A LAG  ++   N G  D    +I  + +F 
Sbjct: 183 TQQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITM--NYGTFDFYAGFIIGIKAFT 240

Query: 451 VVVMGGVGQLAGTVYAALGLGILNKFIEGWAGAVLAKI---AVLVFIIIFIQKRPQGI 505
             V+GG+G L G +   + LGI      G   +    +   ++LV I+IF   RPQG+
Sbjct: 241 AAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIF---RPQGL 295