Pairwise Alignments

Query, 699 a.a., Flagellar biosynthesis protein FlhA from Variovorax sp. SCN45

Subject, 700 a.a., type III secretion system export apparatus subunit SctV from Dickeya dianthicola ME23

 Score =  351 bits (900), Expect = e-101
 Identities = 237/703 (33%), Positives = 389/703 (55%), Gaps = 50/703 (7%)

Query: 16  SGSQFKGLAGPILIIMILSMMVLPLPPFLLDLLFTFNIAMSVMVLLVSMYTMKALDFAAF 75
           S  Q   + G ++++ I+ MM++PLP  L+D+L  FNI +S ++++++MY  K L F+ F
Sbjct: 14  SAMQRSEVVGAVIVMAIVFMMIIPLPTGLIDVLIAFNICISSLLIVLAMYLPKPLAFSTF 73

Query: 76  PAVLLFSTLLRLSLNVASTRVVLMHGHTGPDAAGKVIEAFGHFLVGGNFAVGVMVFIILV 135
           PAVLL +T+ RL+L++++TR +L+        AG V+EAFG+F+VGGN AVG+++F+IL 
Sbjct: 74  PAVLLLTTMFRLALSISTTRQILLQ-----QDAGHVVEAFGNFVVGGNLAVGLVIFMILT 128

Query: 136 LINFMVITKGAGRIAEVGARFMLDAMPGKQMAIDADLNAGLIGEEVARKRRQEVAQEADF 195
           ++NF+VITKG+ R+AEV ARF LDAMPGKQM+ID+DL AGLI  + AR+RR+ +A+E+  
Sbjct: 129 VVNFLVITKGSERVAEVAARFTLDAMPGKQMSIDSDLRAGLIDAQQARQRRENLAKESQL 188

Query: 196 YGSMDGASKFVRGDAIAGLLIMVINIIGGLIVGMVQHGLDFSTAGKTYTLLAIGDGLVAQ 255
           +G+MDGA KFV+GDAIA L+I+ IN+IGG  +G++Q+G+    A   Y++L IGDGL+AQ
Sbjct: 189 FGAMDGAMKFVKGDAIASLVIVFINMIGGFAIGVLQNGMAAGDAMHIYSVLTIGDGLIAQ 248

Query: 256 IPALVISTAAGVIVSRVT-----TDEDVGSQLTGQLFANPQVLFLTAGIVGLLG--MIPG 308
           IPAL+IS  AG+I++RV+     TD ++G ++  QL + P+   +++  VG+LG  ++PG
Sbjct: 249 IPALLISLTAGMIITRVSADGQKTDNNIGREIAEQLTSQPKAWIISS--VGMLGFALLPG 306

Query: 309 MPNLAFLLIAGGLVWLGRRLVKR-KPQQQAAQEAAAAQAATLAPGGEMAEATWDDVAMVD 367
           MP L FL+I+  LV LG  L +  + +Q   Q+A  A  +  A      +  + D+   +
Sbjct: 307 MPTLVFLIIS--LVSLGSGLFQLWRVKQSGLQDALLADDSLPA-----EQNGYQDLRRFN 359

Query: 368 PLGMQVGYRLIPLVDQSQQGELLGRIKSIRKKIAQDIGFLVPVVHIRDNLEIKPNTYVIS 427
           P    +          +    L+  I+ +R ++    GF +P   I  N  +  + +   
Sbjct: 360 PTRAYLLQFHTVWQGAAAAAVLVQDIRRLRNRLVYHFGFTLPSFDIEFNPNMPEDEFRFC 419

Query: 428 LKDVEIGRGEAFPNQWMAINPGQV------SGTLPGAPTRDPAFGLPAVWIDAS----QR 477
           + ++   R  +F    +A+  GQ+       G + G P RD       +W+       Q+
Sbjct: 420 VYEIPQLRA-SFGVPLLAVPRGQLPEATLDDGMMLGLPARDEHH---LLWLTPEHPLLQQ 475

Query: 478 QQAQVYGYTVVDACTVMATHLNHLIQTHAAELLGRQEVQQLLDQIAKTAPKLTEDLVPKV 537
            +   +  TV     ++ + + + I    A+ +G QE + +L  +    P+L ++L  ++
Sbjct: 476 PELSPWSPTV-----LILSRMENAIHRSGAQFIGLQETKSILAWLESEQPELAQEL-QRI 529

Query: 538 LSLSTLHKVLQNLLDEEVPIRDMRTILDVMAEHAPTIKDPTELTTLTRLALGRAITQQLF 597
           + LS    VLQ L  E VP+R +R I + + E     +D   LT   RL L   I  Q +
Sbjct: 530 MPLSRFASVLQRLASERVPLRSVRPIAEALIEIGQHERDINALTDYVRLELKAQICHQ-Y 588

Query: 598 PGDAEMQVIGLDGALDGVLQQALSNSG-----GIEPGIADNLLHQAQAAIQRQEQMGLAP 652
             D  + V  L    + +L+ AL  +       +    A  LL Q + A      +  + 
Sbjct: 589 SQDDSLTVWLLTPETEELLRDALRQTQNDTFFALTQEYAATLLGQLRHAF--PPMVPPSA 646

Query: 653 VLVVQHSLRVLLSRFLRRSLPQLKVLSHAEIPDSRTIKITAAI 695
           +++V   LR  L   L+     + VLS  E+    +I +   I
Sbjct: 647 LILVAQDLRSPLRILLQDEFHHVPVLSFTELESHLSINVAGRI 689