Pairwise Alignments

Query, 698 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45

Subject, 890 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

 Score =  325 bits (833), Expect = 6e-93
 Identities = 229/707 (32%), Positives = 352/707 (49%), Gaps = 101/707 (14%)

Query: 3   LSQFTQAFFVEAIELLAEMEQLLLDLDVEAPDSEQLNAIFRAAHSIKGGAATFGFTALTN 62
           +    + F  E  E L   +  L+  + +  +++ LN IFR  H+IKG     G   L +
Sbjct: 1   MDDLLREFLTETSESLDVADVELVKFEQDPNNAQILNNIFRLVHTIKGTCGFIGLPRLAS 60

Query: 63  TTHVLETLLDRARHGQLSLNGRMIDAFLETKDALQEQLTAYQAGQEPNPDMVAHICGVLQ 122
             H  ETL+DR R G+  +    +   L T D ++  L   +  +   P+          
Sbjct: 61  LAHAAETLMDRFREGR-PVTTDAVGLVLSTIDRIKLLLQHVEETEGSEPEG--------- 110

Query: 123 QLALESGDESLAAHAAATAAAAPVAAPAPAPVAAAAPAEAAVPAGDGVLRIRFARLSDSE 182
               E  D      A A A  AP A P PAP     PA+                    E
Sbjct: 111 ----EDRDLISLLEAMAEAVDAPAAPPPPAP--PPQPAQTL------------------E 146

Query: 183 CDLLAGEL--SNLGKVLSRTRSNDQLTVLLETTCDPDDIVAVCCFVIDESQIDITREAAA 240
             LL GEL    L ++   T+                                       
Sbjct: 147 RPLLPGELPLDELDRIFRETK--------------------------------------- 167

Query: 241 AVVAPEPAAPAPAAEAPAKAPAVVAAAAPVAQAAPAAPAATAAPAAAAGTKESSSIRVDV 300
             V P P APAPAA  P  APA+  A A    AA  A  A    A         SIRV V
Sbjct: 168 --VDPLPPAPAPAAP-PKPAPAMPKADADATHAAAQAGEAHGVAA--------QSIRVHV 216

Query: 301 EKVDQLINLVGELVITQSMLTQAATMLDPVAYERFLSGLGHLERNARDLQESVMSIRMMP 360
             ++QL+ +V ELV+T++ L + A   D   Y+  L  L ++     +LQE+VM  RM P
Sbjct: 217 GVLEQLMTMVSELVLTRNQLMEIARRHDEPEYKVSLQRLSNV---TGELQEAVMRTRMQP 273

Query: 361 MDYVFSRFPRVIRDVSAKLGKQVRLDTYGKETELDKGLIERIVDPLTHLVRNSLDHGIET 420
           +   + + PR++RD++ +LGKQ+ L+  G +TELD+ ++++I DPLTH+VRNS DHG+E 
Sbjct: 274 IGNAWQKLPRIVRDLAQELGKQIELEQVGADTELDRQVLDQIKDPLTHMVRNSADHGLEM 333

Query: 421 PDVRLAKGKDATGQLLLSAQHHGGNIVIEVSDDGAGLNRERILAKALQQGLPVS---ETM 477
           P+ R A GK   G + LSA H GG++++E+SDDG GL+  RI  KAL+ GL        M
Sbjct: 334 PEQRRAAGKSERGLIRLSAYHEGGHVIVEISDDGRGLDVARIKQKALENGLATEAELAKM 393

Query: 478 PDEEVWQLIFAPGFSTAEQVTDISGRGVGMDVVKRNIQEMGGHVEIHSRGGQGTTTRIVL 537
           PD +V++ IF  GFSTA++VT++SGRGVGMDVV+ N++ +GG V++ SR G+G+T  I +
Sbjct: 394 PDSQVFRFIFHAGFSTAQKVTNVSGRGVGMDVVRSNLESIGGTVDVRSRQGEGSTFVIKI 453

Query: 538 PLTLAILNGMSVKVGDEAYILPLSYVIESLQPLPEHLHSIT--ADGHVIRVRGEYLPLIE 595
           PLTLAI+  + V+   E + LP S V E ++      H IT   +  V+ +R   LP++ 
Sbjct: 454 PLTLAIVPALIVRAAGERFALPQSAVEELVRVQAGSDHEITWLNNSPVLGLRDRLLPIVS 513

Query: 596 LHRVFDVAGAQTHPTQ-----GILVIVQADDSRFALLVDELLGQHQVVVKNLETNYRKVP 650
           L  +  ++  +    +      ++V+++     F ++V+ +    ++VVK + +  R++P
Sbjct: 514 LGALLGLSPERDGRDEALWERALIVVMKVGHQTFGVVVEAVSHTEEIVVKPMASALRQLP 573

Query: 651 GISAATILGDGSVAFIIDVGAMPRIQRAQAASAAALA--GAARRTDA 695
            +S +TILGDG V  I+D   + +   A+  +A  ++  GA R++ A
Sbjct: 574 MVSGSTILGDGRVIMILDPAGLAQHAAARGGAAEEVSHHGAGRQSRA 620