Pairwise Alignments

Query, 698 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45

Subject, 654 a.a., fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein (NCBI) from Escherichia coli BW25113

 Score =  721 bits (1862), Expect = 0.0
 Identities = 401/686 (58%), Positives = 481/686 (70%), Gaps = 36/686 (5%)

Query: 1   MDLSQFTQAFFVEAIELLAEMEQLLLDLDVEAPDSEQLNAIFRAAHSIKGGAATFGFTAL 60
           MD+S F Q FF EA ELLA+MEQ LL L  EAPD+EQLNAIFRAAHSIKGGA TFGF+ L
Sbjct: 3   MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62

Query: 61  TNTTHVLETLLDRARHGQLSLNGRMIDAFLETKDALQEQLTAYQAGQEPNPDMVAHICGV 120
             TTH++E LLD AR G++ LN  +I+ FLETKD +QEQL AY+  QEP+     +IC  
Sbjct: 63  QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122

Query: 121 LQQLALESGDESLAAHAAATAAAAPVAAPAPAPVAAAAPAEAAVPAGDGVLRIRFARLSD 180
           L+QLALE+  E+            P A    + VA + P +          RI  +RL  
Sbjct: 123 LRQLALEAKGET------------PSAVTRLSVVAKSEPQDEQ-SRSQSPRRIILSRLKA 169

Query: 181 SECDLLAGELSNLGKVLSRTRSNDQLTVLLETTCDPDDIVAVCCFVIDESQIDITREAAA 240
            E DLL  EL +L  +    +  D L+ +L      DDI AV CFVI+  QI        
Sbjct: 170 GEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFE----T 225

Query: 241 AVVAPEPAAPAPAAEAPAKAPAVVAAAAPVAQ-AAPAAPAATAAPAAAAGTKESSSIRVD 299
             V+P+ + P                  PV + AA  AP           + ES+SIRV 
Sbjct: 226 VEVSPKISTP------------------PVLKLAAEQAPTGRVEREKTTRSNESTSIRVA 267

Query: 300 VEKVDQLINLVGELVITQSMLTQAATMLDPVAYERFLSGLGHLERNARDLQESVMSIRMM 359
           VEKVDQLINLVGELVITQSML Q ++ LDPV +   ++ +G L+RNARDLQESVMSIRMM
Sbjct: 268 VEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMM 327

Query: 360 PMDYVFSRFPRVIRDVSAKLGKQVRLDTYGKETELDKGLIERIVDPLTHLVRNSLDHGIE 419
           PM+YVFSR+PR++RD++ KLGKQV L   G  TELDK LIERI+DPLTHLVRNSLDHGIE
Sbjct: 328 PMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIE 387

Query: 420 TPDVRLAKGKDATGQLLLSAQHHGGNIVIEVSDDGAGLNRERILAKALQQGLPVSETMPD 479
            P+ RLA GK++ G L+LSA+H GGNI IEV+DDGAGLNRERILAKA  QGL VSE M D
Sbjct: 388 LPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSD 447

Query: 480 EEVWQLIFAPGFSTAEQVTDISGRGVGMDVVKRNIQEMGGHVEIHSRGGQGTTTRIVLPL 539
           +EV  LIFAPGFSTAEQVTD+SGRGVGMDVVKRNIQ+MGGHVEI S+ G GTT RI+LPL
Sbjct: 448 DEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPL 507

Query: 540 TLAILNGMSVKVGDEAYILPLSYVIESLQPLPEHLHSITADGHVIRVRGEYLPLIELHRV 599
           TLAIL+GMSV+V DE +ILPL+ V+ESLQP    LH +     V+ VRGEYLP++EL +V
Sbjct: 508 TLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKV 567

Query: 600 FDVAGAQTHPTQGILVIVQADDSRFALLVDELLGQHQVVVKNLETNYRKVPGISAATILG 659
           F+VAGA+T  TQGI+VI+Q+   R+ALLVD+L+GQHQVVVKNLE+NYRKVPGISAATILG
Sbjct: 568 FNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILG 627

Query: 660 DGSVAFIIDVGAMPRIQRAQAASAAA 685
           DGSVA I+DV A+  I R Q  +  A
Sbjct: 628 DGSVALIVDVSALQAINREQRMANTA 653