Pairwise Alignments

Query, 321 a.a., Flagellar motor rotation protein MotB from Variovorax sp. SCN45

Subject, 285 a.a., flagellar motor protein from Pseudomonas putida KT2440

 Score = 53.9 bits (128), Expect = 4e-12
 Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 25/287 (8%)

Query: 26  WKIAYADFMTAMMAFFLVMWLLSISSPKQREGIAEHFRMPLRVAMHGGDKASLSNSMIPG 85
           W ++YADF+T + AFF+VM+  SISS  + +     +++  +  +   +    S   IP 
Sbjct: 16  WLVSYADFITLLFAFFVVMY--SISSINEGK-----YKVISQALLGVFNDPERSMKPIPI 68

Query: 86  GGADVMHV---EGEVKQADAEEEADATRLAEMKKKLDELIEKSPVFQQFRSQILID-ITT 141
           G    + V   E  VK ++  E   A    +  K + +      V   F   I  D +T 
Sbjct: 69  GDEQPLSVRPAEPLVKDSEQTEAGLAATNVDPLKTISD-----DVRDAFGDLINSDQMTV 123

Query: 142 EGLRLQI-VDTENRPMFELASARVVPHMRAILRELAPALNGLPNKLTLSGHTDAIVYNND 200
            G  L I ++  +  +F    A       AI+ ++A  L    N + + G TD +     
Sbjct: 124 RGNELWIEIELNSSLLFGSGDAMPSDKAFAIIEKVASILKPFANPVHVEGFTDNLPIRTA 183

Query: 201 RSYGNWELSADRANASRRELVVGGLTEGKVLRVIGLADSMHL---DRAEPRNPINRRISI 257
           +   NWELS+ RA +  R L + G+   ++  V G  +   +   D AE R   NRR+ +
Sbjct: 184 QYPTNWELSSARAASIVRLLAMEGVNPARMASV-GYGEYQPVASNDTAEGR-ARNRRV-V 240

Query: 258 ILLNRRTQERIERENSSDGGSMRVGKLTPAGAAPKAAAALPAQTPAP 304
           ++++R  + R     S    +     L  AG   ++A A+ A    P
Sbjct: 241 LVISRNLEVRRSLTGSGSANATPDAALRRAGT--QSAPAIQATVARP 285