Pairwise Alignments

Query, 321 a.a., Flagellar motor rotation protein MotB from Variovorax sp. SCN45

Subject, 344 a.a., membrane protein from Magnetospirillum magneticum AMB-1

 Score =  182 bits (462), Expect = 1e-50
 Identities = 119/335 (35%), Positives = 172/335 (51%), Gaps = 64/335 (19%)

Query: 1   MSEGKPQIIIKHVHKGGGGGHHGGGWKIAYADFMTAMMAFFLVMWLLSISSPKQREGIAE 60
           M+EG  QIIIK V K  GG H GG WK+AYADF+TAMMAFFL++WLL+  + +Q  G++ 
Sbjct: 1   MAEGGQQIIIKRVKKVAGGAH-GGAWKVAYADFVTAMMAFFLLLWLLNAVTEEQLTGVSN 59

Query: 61  HFRMPLRVAMHGG-----------DKASLSN----------------------------- 80
           +F   +      G           + A +SN                             
Sbjct: 60  YFAPTMASKSSSGAGGLLGGKVIGEGAQVSNTSSPSLVQHLPPASIGPGGEDLTGSKEFA 119

Query: 81  -------SMIPGGGADVMHVEG-------------EVKQADAEEEADATRLAEMKKKLDE 120
                  S+ PG GA     +G             E K+A A+ E    +  + K+ L+ 
Sbjct: 120 PENEGDSSLGPGKGAGQGEGQGAGQGKDRSGMSEQEFKEAQAQREQQ--KFDKAKEVLEG 177

Query: 121 LIEKSPVFQQFRSQILIDITTEGLRLQIVDTENRPMFELASARVVPHMRAILRELAPALN 180
            ++  P  +QF+  +L+D T EGLR+QI D E   MF   S+    H RA+L  ++  + 
Sbjct: 178 AMKGIPEMKQFQGSMLVDNTPEGLRIQITDQEGLAMFPSGSSAPYGHTRAMLDLVSRVVR 237

Query: 181 GLP-NKLTLSGHTDAIVYNNDRSYGNWELSADRANASRRELVVGGLTEGKVLRVIGLADS 239
            LP N++ +SGHTDAI + +   Y NWELSADRA A+RR L+  G+ EG++ R++G AD 
Sbjct: 238 QLPDNRIAISGHTDAIPFRDPSGYTNWELSADRALATRRALIASGVPEGRIDRIVGRADQ 297

Query: 240 MHLDRAEPRNPINRRISIILLNRRTQERIERENSS 274
             LD+A+P+   NRRISIILL       ++ ++ S
Sbjct: 298 EPLDKADPKGLRNRRISIILLRENDVGPVDSQSLS 332