Pairwise Alignments

Query, 481 a.a., Flagellar cap protein FliD from Variovorax sp. SCN45

Subject, 452 a.a., flagellar filament capping protein from Pseudomonas putida KT2440

 Score =  200 bits (508), Expect = 1e-55
 Identities = 153/491 (31%), Positives = 246/491 (50%), Gaps = 52/491 (10%)

Query: 1   MATISSLGVGANLDLATLLTQLQTAESQPLVA-LQAKAKSYTSKLSAYGTIQSALGTLQA 59
           MA+ +  G+G+ +D  +++  L  AE  P    +  + K+ T+++SA G I++AL T ++
Sbjct: 1   MASTTVSGIGSGVDTQSIVKALADAEKAPKQQQITTQQKTTTTQVSAVGMIKNALDTFRS 60

Query: 60  AAKKLGDPTLFQSVTGTPTVSGILSASSTDVSSAGNYTIDVGQLAQAQTLVSAGQADSKT 119
           A  KL   T F  + GT +   +  A+ T  +SAGNY ++V QLA               
Sbjct: 61  AIAKLNTSTSFTGLAGTSSDEKVAKATVTASASAGNYALEVTQLAT-------------- 106

Query: 120 AIGSGKITIDFGAISGGTLNATTGQYTGATFTADSSQPAKSITIDSSNNTLEGIRDAING 179
              S KIT D    +GG  +         T T   S    ++TI     TL+ +RD IN 
Sbjct: 107 ---SSKITTD--VFAGGVSSVVNNSGDPQTLTISQSSADYNVTIPDGA-TLQQVRDLINK 160

Query: 180 --AKAGVTAAIVNDGSGTPNRLVLTSSATGEKSSMRISVDGDAALQGLLSNDPAGSQNLK 237
                G+ A I+ D  G+  RLV++SS TGE S + +S  GD++L           QN  
Sbjct: 161 QLGSQGINANILTDAKGS--RLVMSSSTTGEGSDITLS--GDSSLV----------QNAT 206

Query: 238 QTAAAQNAKLNVNGIDVVSATNTVKDAIQGTTLTLVGTGKTGLAMKENSAGVKTAITDFV 297
             A AQNAK  ++G+++ S +NTV  AI G    L+  GK+ L++  N+  +KT++  FV
Sbjct: 207 PGAPAQNAKYTIDGLELESKSNTVTGAISGVNFELLAEGKSRLSVATNTTTLKTSVQSFV 266

Query: 298 KAYNSLQSTAKTLTAY----DADTKTAAALVGDSTLRNLQTRIRQALTTPQAGGANDMKV 353
            AYN+L +   T T      DA T TA AL GD+T+R L + +R  L   ++ GA  + +
Sbjct: 267 SAYNALITAINTQTKVTATGDASTTTAGALTGDATMRALVSTVRNELV--KSTGAGSISM 324

Query: 354 LTEIGV-AFQKDGTLAVDSDKLDKALAANLKGVANLFSSATGSTGGYGKQIDAIVTDL-- 410
           L+++G+   Q+ G L +D  K DKA+A   KG A++ +  TG  G   +   A  TD   
Sbjct: 325 LSQMGINTDQQTGLLVLDDTKWDKAVA---KGAADIAAVFTGDKGLIKRMTAA--TDAYT 379

Query: 411 -NTNALKVASDGVTSTIKKLDDQYDAMQVRVDATVDRYRKQFNQLDVLINNLNNTKNYLT 469
             T  L   +  +   + +L  Q +A+  R++        ++N +D L+  LN T + + 
Sbjct: 380 GTTGILATRTKNLNDNLTELTKQQEALDRRIETLTATLTAKYNAMDTLVAKLNATSSSVM 439

Query: 470 QQFEAMSGSSS 480
               AM+ +++
Sbjct: 440 TTLNAMNKANN 450