Pairwise Alignments

Query, 156 a.a., Flagellar motor switch protein FliN from Variovorax sp. SCN45

Subject, 161 a.a., C-ring protein of the flagellar basal body from Pseudomonas putida KT2440

 Score =  126 bits (316), Expect = 2e-34
 Identities = 70/145 (48%), Positives = 99/145 (68%), Gaps = 9/145 (6%)

Query: 12  ADDWAAALAEQTAATAPAPVPEPDPAAAAAVAAAVAPASAQVFQQIQDTPAANPGA---G 68
           AD+WAAAL E+T +   A +   D        ++  P    + ++   +P  N      G
Sbjct: 22  ADEWAAAL-EETGSAGQADI---DALLGGDTGSSSGPGRLPM-EEFASSPKPNENVSLEG 76

Query: 69  PVDIARVLDVPVQLTAEIGRTRITIKSLLQLSQGSVVELDGLAGQPLDVLINGYLIAQGE 128
           P ++  +LD+PV ++ E+G T I I++LLQL+QGSV+ELD LAG+PLDVL+NG LIA GE
Sbjct: 77  P-NLDVILDIPVNISMEVGSTEINIRNLLQLNQGSVIELDRLAGEPLDVLVNGTLIAHGE 135

Query: 129 VVVVNEKYGIRLTDIVTPSERMQKL 153
           VVVVNEK+GIRLTD+++PSER++KL
Sbjct: 136 VVVVNEKFGIRLTDVISPSERIKKL 160