Pairwise Alignments

Query, 252 a.a., Flagellar biosynthesis protein FliP from Variovorax sp. SCN45

Subject, 217 a.a., type III secretion system protein SsaR from Pseudomonas simiae WCS417

 Score =  133 bits (335), Expect = 3e-36
 Identities = 77/201 (38%), Positives = 120/201 (59%), Gaps = 8/201 (3%)

Query: 57  SLTFLPALLLSMTSFTRILIVLGLLRTAIGTQTSPPNQILVGLSLFLTFFVMSPVFDKAY 116
           +L  +P LL+  TSF +I+IVL + R AIG Q  PP+  + G++L  T F+M+PV     
Sbjct: 17  ALALMPMLLIICTSFLKIVIVLMITRNAIGVQQVPPSMAVNGIALAATLFIMAPV-GYEI 75

Query: 117 TEAYQPFAENKISADKALERG---IAPFKTFMLKQTRETDLALF----ARLAKAPEMQGP 169
            E  +    +  S    L+ G   I P + FML+      L       ARL  A   Q  
Sbjct: 76  AEGIKASPVDTSSVINFLQTGREAIQPLRAFMLRNVDPDVLTHLLENTARLWPAKMAQEV 135

Query: 170 EDVPLRILLPSFVISELKTAFQIGFTIFIPFLIIDLVVASVLMSMGMMMVPPASIALPFK 229
           +   L +L+P+FV+S+L+  F+IGF I+IPF++IDL+V+++L+++GM MV P +I+LP K
Sbjct: 136 QREDLILLVPAFVLSQLQAGFEIGFLIYIPFIVIDLIVSNLLLALGMQMVSPMTISLPLK 195

Query: 230 LMLFVLADGWQLMIGALAQSF 250
           L+LFV+  GW  ++ +L  S+
Sbjct: 196 LLLFVMVSGWSRLLDSLFLSY 216