Pairwise Alignments

Query, 654 a.a., Flagellar hook-associated protein FlgK from Variovorax sp. SCN45

Subject, 680 a.a., Flagellar hook-associated protein FlgK from Pseudomonas putida KT2440

 Score =  347 bits (891), Expect = e-100
 Identities = 235/688 (34%), Positives = 358/688 (52%), Gaps = 54/688 (7%)

Query: 4   SMFYTGLSGLGVARAALMTTAHNTANVYTAGYSRQVAEIATGGAISSGSGYIGTGANVTT 63
           S+   GLSGL  ++AAL  T++N AN  T+GYSRQ    A G + + G+G++GTG  +  
Sbjct: 3   SLISIGLSGLSASQAALSVTSNNIANAATSGYSRQQTVQAAGPSHNIGAGFLGTGTTLAD 62

Query: 64  VSRSYDRYLTAQLASAQSNSVALATNGTQINRIDTLLADKTSGISALMQNFFTSIQGVAN 123
           V R Y  YL  QL +A S      T   QI  +D LLAD+ +GIS+++  FF+++Q  A 
Sbjct: 63  VRRIYSSYLDNQLQTATSLQADSVTFQDQITSVDKLLADRDTGISSVLTAFFSALQTAAA 122

Query: 124 TPADPAARQQMISSAQALASKFRSTDQYLSDLNTSVNEQIDGSVEQINVYATKIASLNQQ 183
            P D A+RQ +++ AQ L+++F +    L+  N ++N Q+D    Q+N     IA  N+Q
Sbjct: 123 KPGDVASRQLLLTQAQTLSNRFNAVSTQLTQQNATINSQLDTMAGQVNKLTANIAEYNKQ 182

Query: 184 ISQATAMASGQPPNDLLDQRDLLVSQLSQVVDVKVLQQDNGKYNVFIATGQSLVVGDYAS 243
           I+ A+  ASG  PN LLD R   V QL+++V V V ++D G Y+V++ +GQSLV G  A+
Sbjct: 183 ITAAS--ASGNTPNSLLDARSEAVRQLNELVGVTVQERD-GNYDVYLGSGQSLVTGTKAN 239

Query: 244 QMVSVNSAADPTRKVVALKGFGGNTAELDDSTFKGGVLGGLMTFRSETLIPTQNSIGRLA 303
            +      AD ++  VAL+    + +    S   GG +GGL+ +R + L P+ N +GR+A
Sbjct: 240 TLSVEPGVADKSQ--VALRINYDSFSSDVTSVVSGGAIGGLLRYRQDVLTPSMNELGRVA 297

Query: 304 MSVSDAVNAQHKLGVDLNGALGQNFFN---------QAVPGVMSNAKNTGNLEFGATLTD 354
           + V+D++N+Q   G+D NG  G + F+         Q      +N+  +GNL+   T+ +
Sbjct: 298 LVVADSINSQLGQGLDANGQFGSSLFSSINSATAIAQRSLASSNNSAGSGNLD--VTIAN 355

Query: 355 ASKLTTSDYDVSVTNVAGTLTYTVTRLSDKTSMGSF----TTFPITFDGVSLNAASGTAQ 410
           +  LTT DY+V  T+ +    Y+V R SD T MGSF       P+  DG SL    G   
Sbjct: 356 SGALTTYDYEVKFTSAS---QYSVRR-SDGTDMGSFDLNADPAPV-IDGFSLALKGGGLA 410

Query: 411 AGDSFLVQPTRTGARDLDVLVRDPAKVAAASPLVTGNTAGNKGNAALSAATVDAS---YP 467
           AGDSF V PTR  A  +   + D  K+A A P+     +GN G   ++  T+  S   Y 
Sbjct: 411 AGDSFKVIPTRAAAGSITTTLTDANKLAFAGPISAAAGSGNSGTGTITQPTLGESLDIYG 470

Query: 468 GTPLA---------GPVTLSFDAATGTLSGFPATSAVTVTLANGT-------------ST 505
           G   A          PV + FDAA+G   G+    A    +  G+               
Sbjct: 471 GADTALIQQSIRDSMPVRVVFDAASGGSQGYKLFDAKGTQIGTGSVVPGQDNKLSIAVPM 530

Query: 506 TYAAGAAVPYTAGAKMSFDGVTVSMTGAPSQGDTFTIKNNTSGVSDGSNALLLGALQRKT 565
             AAG  +   +G   +F  V  ++ G+P+  D+FT+  N  G +D  NA  L  LQ K+
Sbjct: 531 LDAAGDPILDGSGNPRTF-AVETTIGGSPAANDSFTLSFNADGKADNRNANALLDLQTKS 589

Query: 566 TMANGTAT---FNGAYSQLVSEVGNRAMAVKVAAATQDSVTGQIKASQQSVSGVVQDEET 622
           T+   + T   F  AY+ LV  VG +A    +      +V      S+ +VSGV  D+E 
Sbjct: 590 TVGTNSGTGTSFTSAYASLVERVGAKASQATIDTTATQAVLKSATESRSAVSGVNLDDEA 649

Query: 623 ANLLMFQQMYQANAKVIQTASTMFDAIL 650
           A+L+ FQ  Y A++++I+ A   F  ++
Sbjct: 650 ASLVKFQHYYTASSQIIKAAQETFSTLI 677



 Score = 26.6 bits (57), Expect = 0.004
 Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 3/93 (3%)

Query: 96  IDTLLADKTSGISALMQNFFTSIQGVANTPADPAARQQMISSA---QALASKFRSTDQYL 152
           + +L++   SG+SA       +   +AN      +RQQ + +A     + + F  T   L
Sbjct: 1   MSSLISIGLSGLSASQAALSVTSNNIANAATSGYSRQQTVQAAGPSHNIGAGFLGTGTTL 60

Query: 153 SDLNTSVNEQIDGSVEQINVYATKIASLNQQIS 185
           +D+    +  +D  ++          +   QI+
Sbjct: 61  ADVRRIYSSYLDNQLQTATSLQADSVTFQDQIT 93