Pairwise Alignments

Query, 544 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

Subject, 566 a.a., HAMP domain-containing protein from Dickeya dianthicola ME23

 Score =  371 bits (953), Expect = e-107
 Identities = 240/530 (45%), Positives = 326/530 (61%), Gaps = 39/530 (7%)

Query: 6   VHDMSTDLATNWMPATRSLLEMKNLMSRYRTQELQHILAGSYDEMAVYE--KAMDETWAN 63
           ++   ++L + W      LL+ +N ++R  T+       G    ++  E  +   +    
Sbjct: 46  INQQKSELESTWS----YLLQTRNTLNRAGTRYAMDASGGVSGGVSAKELIELAKKQLVI 101

Query: 64  LQKNRAEYEKLISEPEE--------REIYPTLQKLLTEYSLEHNKIVAISHTQENE---Q 112
              + A YEK+    ++        ++ Y TL   L+E       IV IS  +  E   Q
Sbjct: 102 ANTHFANYEKIPYTDQQDPAVAQVVKDNYTTLNSALSEL------IVFISTGRLKEFFDQ 155

Query: 113 ATALIRGKSLQLSRDINGALDKLTEVNVAGAIRAGETADTVYGEARLWVLGLLLGSVALG 172
            T   + K  +       + DK+     A A+    +A   Y  A   ++ + +  VA+ 
Sbjct: 156 PTQSFQDKFEKAYYSYKESYDKV----YANAVEENNSA---YSTALWLLISVAILVVAMA 208

Query: 173 LVLALWIARIVSRPLSEAVKVAQSVAAGDLTSHIEARTTDETGLLLEALKGMNDSLAKIV 232
           LV+ L I R + +PL+  ++  + +A GDLT+ I+   T+E G+L + L+ M       V
Sbjct: 209 LVVWLGINRSLIQPLTNLIEHIRHMAKGDLTTRIDFHGTNEMGILADTLRHMQTEFFTTV 268

Query: 233 GEVRIGTDTIATASSQIASGNQDLSSRTEEQASSLEQTAASMEELTSTVKQNADNARQAN 292
             VR G + I T +S+I++GN DLSSRTE+QA++LE+TAASME+LTSTVKQNA+NARQA+
Sbjct: 269 SAVRQGAEAIYTGASEISAGNSDLSSRTEQQAAALEETAASMEQLTSTVKQNAENARQAS 328

Query: 293 QLAVSASEVAVKGGSVVSQVVDTMGSINASSKKIVDIIGVIDGIAFQTNILALNAAVEAA 352
           QLA+SASE A KGG VV  VV TM +I  SS+KI DI  VIDGIAFQTNILALNAAVEAA
Sbjct: 329 QLALSASETAQKGGKVVDNVVKTMHNIAGSSQKIADITSVIDGIAFQTNILALNAAVEAA 388

Query: 353 RAGEQGRGFAVVASEVRSLAQRSAAAAKEIKTLIGDSVEKVEEGSKQVAEAGRTMDEIVG 412
           RAGEQGRGFAVVA EVR+LAQRSA AAKEIK+LI DSV +VEEGS  V  AG TM EIVG
Sbjct: 389 RAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKSLIDDSVNRVEEGSVLVESAGETMGEIVG 448

Query: 413 SVRRVTDIMGEITAASQEQTSGIEQINQAITQMDQVTQQNAALVEEASAAAQSLQEQAGS 472
           +V RVTDIMGEI +AS+EQ+ GI+Q+  A+T+MD+VTQQNA+LVEE+++AA +L+EQ   
Sbjct: 449 AVTRVTDIMGEIASASEEQSRGIDQVGLAVTEMDRVTQQNASLVEESASAANALEEQVRV 508

Query: 473 LVQSVSIFKLDANALATRASFTRLTPIPRAAAAVKPAPKRPAKALPARRE 522
           L Q+V++F+L    +A R         P A AA  P  K+   A PA  E
Sbjct: 509 LNQAVAVFRLSDGVVAGR---------PTAIAARMPVTKQVLLATPASAE 549