Pairwise Alignments

Query, 533 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

Subject, 642 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  397 bits (1020), Expect = e-115
 Identities = 247/490 (50%), Positives = 316/490 (64%), Gaps = 36/490 (7%)

Query: 56  ISDWYVLTYSAIARTSMIARTTDETLPVTFADVISDSVKKGTETMAKVEKLLVTPEEKAI 115
           +SD + LT      T  +   T + +P    +++  +  +G+  + +      TPEEKA 
Sbjct: 157 VSDHFGLTSDPDKSTYFLIIGTLQQMP-RLTEMLGQARARGSALLVRQS---ATPEEKAQ 212

Query: 116 FKSIMELRAKYQAAKDEVGKAKASGN--TVETTRAF-----KETFQPAAKAYESRVLELL 168
             S++E RA+    + ++   KA  +  T++T  A      +  F+ A K    +++E  
Sbjct: 213 IASLVE-RARVGVRELDISLEKAFEHDATLKTRLAAAHAQARSEFEGALKLAREQIVEAP 271

Query: 169 SIE----------RKAIDDMSASIDAANARA--------------LNLSLLLAMATVAIG 204
           +++            AID M    D A                  L   L    A ++ G
Sbjct: 272 ALQYASADYFKATTAAIDGMYGLSDRATKELGVEIDSRYTEQRGELAWVLSTIAALLSAG 331

Query: 205 AVFSFLISRSIVRPLTRAVEVAETVAAGDLSVDIRAESRDETGQLMQALKNMNDSLAKVV 264
             F+ +I RSI RP   A  VA  VAAGDLS  +     DE GQL+QA+  M   L +VV
Sbjct: 332 VAFAIVIGRSITRPAELARTVAARVAAGDLSQAVPPGGGDEMGQLLQAMSTMQAELTRVV 391

Query: 265 GEVRTGTETIATASGQIASGNHDLSSRTEQQASSLEQTAASMEELTSTVKQNADNARQAN 324
           G VR   E +A AS QIA GNHDLS+RTEQQAS+LE+TAASMEEL+STVK NA+NA+QAN
Sbjct: 392 GSVRGNAEGVAAASSQIAQGNHDLSARTEQQASALEETAASMEELSSTVKLNAENAQQAN 451

Query: 325 QLAVSASEVAVKGGSVVSQVVDTMGSINASSKKIVDIIGVIDGIAFQTNILALNAAVEAA 384
           +LA+SASEVA +GG VV+QVVD M  IN SS++I DII VIDGIAFQTNILALNAAVEAA
Sbjct: 452 RLAISASEVATQGGDVVAQVVDMMKGINDSSRQIADIISVIDGIAFQTNILALNAAVEAA 511

Query: 385 RAGEQGRGFAVVASEVRSLAQRSAAAAKEIKTLIGDSVEKVEAGSKQVAEAGRTMDEIVG 444
           RAGEQGRGFAVVA+EVRSLAQRSAAAAKEIK LIG SV++VE G+  V +AG TM E+V 
Sbjct: 512 RAGEQGRGFAVVAAEVRSLAQRSAAAAKEIKGLIGVSVDRVEQGTALVDQAGSTMSEVVS 571

Query: 445 SVRRVTDIMGEITAASQEQTSGIEQINQAITQMDQVTQQNAALVEEASAAAQSLQEQAGS 504
           S+RRVTDI+GEI+AAS+EQ+ G+ Q+ +A+TQMDQ TQQNAALVEE++AAAQSL+ QA  
Sbjct: 572 SIRRVTDIVGEISAASREQSDGVSQVGEAVTQMDQATQQNAALVEESAAAAQSLKSQADQ 631

Query: 505 LSQIVGVFRL 514
           L Q V  FRL
Sbjct: 632 LVQAVAAFRL 641