Pairwise Alignments

Query, 521 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

Subject, 533 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  606 bits (1562), Expect = e-178
 Identities = 350/518 (67%), Positives = 396/518 (76%), Gaps = 2/518 (0%)

Query: 3   LKDLKIGTRLGLGFAVMLLLMAFIAATGVLRLTNVGHATDEMVEQALVKERLANEWLSNL 62
           L +L+IGTRL + F+V+L L+    A  +L   +   AT  M+E  L KERL ++W   L
Sbjct: 4   LSNLRIGTRLAVAFSVVLGLVVISTAFALLSARSNAEATRVMMESPLAKERLISDWYV-L 62

Query: 63  KSNTVANFAMI-KTTDPAVADYFSKLQAAGSARISPAQKKLESMLDTPEEKALYAKVAAS 121
             + +A  +MI +TTD  +   F+ + +    + +    K+E +L TPEEKA++  +   
Sbjct: 63  TYSAIARTSMIARTTDETLPVTFADVISDSVKKGTETMAKVEKLLVTPEEKAIFKSIMEL 122

Query: 122 RAVVLETVGVLNKLKDSGQLAEANTLVDTKFTDALGVYGGAVEALAQHQREKIDAAARGI 181
           RA        + K K SG   E        F  A   Y   V  L   +R+ ID  +  I
Sbjct: 123 RAKYQAAKDEVGKAKASGNTVETTRAFKETFQPAAKAYESRVLELLSIERKAIDDMSASI 182

Query: 182 AADYVAGRTTLVVLASIAVLLGALFAWRLSLGIVRPLGHAVEVAQTVAAGDLSADIRVES 241
            A         ++LA   V +GA+F++ +S  IVRPL  AVEVA+TVAAGDLS DIR ES
Sbjct: 183 DAANARALNLSLLLAMATVAIGAVFSFLISRSIVRPLTRAVEVAETVAAGDLSVDIRAES 242

Query: 242 RDEAGQLMQALKNMNESLAKVVGEVRTGTDTIATASSQIASGNQDLSSRTEEQASSLEQT 301
           RDE GQLMQALKNMN+SLAKVVGEVRTGT+TIATAS QIASGN DLSSRTE+QASSLEQT
Sbjct: 243 RDETGQLMQALKNMNDSLAKVVGEVRTGTETIATASGQIASGNHDLSSRTEQQASSLEQT 302

Query: 302 AASMEELTSTVKQNADNARQANQLAVSASEVAVKGGSVVSQVVDTMGSINASSKKIVDII 361
           AASMEELTSTVKQNADNARQANQLAVSASEVAVKGGSVVSQVVDTMGSINASSKKIVDII
Sbjct: 303 AASMEELTSTVKQNADNARQANQLAVSASEVAVKGGSVVSQVVDTMGSINASSKKIVDII 362

Query: 362 GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKTLIGDSV 421
           GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKTLIGDSV
Sbjct: 363 GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKTLIGDSV 422

Query: 422 EKVEEGSKQVAEAGRTMDEIVGSVRRVTDIMGEITAASQEQTSGIEQINQAITQMDQVTQ 481
           EKVE GSKQVAEAGRTMDEIVGSVRRVTDIMGEITAASQEQTSGIEQINQAITQMDQVTQ
Sbjct: 423 EKVEAGSKQVAEAGRTMDEIVGSVRRVTDIMGEITAASQEQTSGIEQINQAITQMDQVTQ 482

Query: 482 QNAALVEQASAAAQSLQEQAGSLSQVVGVFQLGRNQLA 519
           QNAALVE+ASAAAQSLQEQAGSLSQ+VGVF+L  ++ A
Sbjct: 483 QNAALVEEASAAAQSLQEQAGSLSQIVGVFRLEGSRAA 520



 Score = 28.1 bits (61), Expect = 8e-04
 Identities = 35/182 (19%), Positives = 69/182 (37%), Gaps = 23/182 (12%)

Query: 118 VAASRAVVLETVGVLNKLKDSGQLAEANTLVDTKFTDALG----VYGGAVEALAQHQR-- 171
           + AS   +++ +GV++ +     +   N  V+       G    V    V +LAQ     
Sbjct: 351 INASSKKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAA 410

Query: 172 ------------EKIDAAARGIAADYVAGRTTLVVLASIAVLLGALFAWRLSLGIVRPLG 219
                       EK++A ++ +A    AGRT   ++ S+  +   +    ++        
Sbjct: 411 AKEIKTLIGDSVEKVEAGSKQVAE---AGRTMDEIVGSVRRVTDIM--GEITAASQEQTS 465

Query: 220 HAVEVAQTVAAGDLSADIRVESRDEAGQLMQALKNMNESLAKVVGEVRTGTDTIATASSQ 279
              ++ Q +   D          +EA    Q+L+    SL+++VG  R      A  + Q
Sbjct: 466 GIEQINQAITQMDQVTQQNAALVEEASAAAQSLQEQAGSLSQIVGVFRLEGSRAAGTARQ 525

Query: 280 IA 281
           +A
Sbjct: 526 LA 527