Pairwise Alignments

Query, 185 a.a., Transcription termination protein NusB from Variovorax sp. SCN45

Subject, 165 a.a., Transcription antitermination protein NusB from Xanthobacter sp. DMC5

 Score = 52.4 bits (124), Expect = 4e-12
 Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 11/143 (7%)

Query: 41  RSRAREFALQALYQHLVGRNDPTDI-----DHFT-RDLAG--FHKADALHYDALLHGSIE 92
           +S AR  A+QALYQ  +      D+      H+  +++ G  F +AD   + +++ G + 
Sbjct: 20  KSAARLGAVQALYQMDMAATPLNDVLAEFESHWLGQEVEGIEFPEADRRLFRSVVEGVLN 79

Query: 93  GAEQLDALIRPLLDRKF--EEISPIEHAVMWIGVYEFQNCLDVPWRVVLNECIELAKEFG 150
              Q+D L+   L + +  + +  +  AV+  G +E     D P RVV+ E + +A  F 
Sbjct: 80  AQRQIDPLVDGTLSKGWPLKRVEAVLRAVLRAGAFELM-AKDPPARVVITEYVNVAGAFL 138

Query: 151 GTDGHKYVNAVLNGLAPQLRPLE 173
             D    VNAVL+ LA +LRP E
Sbjct: 139 DRDETGMVNAVLDALAHELRPDE 161