Pairwise Alignments

Query, 443 a.a., Seryl-tRNA synthetase (EC 6.1.1.11) from Variovorax sp. SCN45

Subject, 427 a.a., seryl-tRNA synthetase from Agrobacterium fabrum C58

 Score =  356 bits (914), Expect = e-103
 Identities = 203/442 (45%), Positives = 271/442 (61%), Gaps = 26/442 (5%)

Query: 1   MLDITLLRKDLASAVAGLEKRKKNQPYLDVSAFTALEAERKTLQTRTEEIQARRNTLNKQ 60
           M DI  +R++  +  A L +R         +   AL+ +R+++    +++Q+RRN  +K+
Sbjct: 1   MHDIKWIRENPEAFDAALARRSVEPA---AAGLIALDEKRRSVIQSLQDMQSRRNAASKE 57

Query: 61  IGPLKAKG--ESVDALMAEVNALKAEQESQSKRLEEIQPEIQALLLAVPNLPHASVPLGE 118
           IG   A+   E  + L AEV  +K       +   ++  E+   L  +PN+P   VP G+
Sbjct: 58  IGAAMAQKNMELAEKLKAEVADIKENMPRAEEEDRQVSAELNDALSRLPNMPFDDVPDGK 117

Query: 119 DEAGNVEMRRWAPQGGAGADAKPLGFAAKDHVDLGAPLG-LDFEMGAKLAGSRFTVMKGP 177
           DE  NV  R    + G          AAK+H ++G  LG +DFE  AKL+GSRFTV+   
Sbjct: 118 DEHDNVVARVTGQKPG-------WNHAAKEHFEIGEALGYMDFERAAKLSGSRFTVLTSQ 170

Query: 178 IARLHRALAQFMLDLQTEKHGYAECYVPYIVNAATLSGTGQLPKFEGDLFAAKKGGQDGE 237
           +ARL RAL QFM+DL T +HGY E   P +V    + GTGQLPKF  DLF    G     
Sbjct: 171 LARLERALGQFMIDLHTSEHGYTEVSSPLMVRDEAMFGTGQLPKFAEDLFRTTDGR---- 226

Query: 238 PAPDHSALYLIPTSEVPLTNFVRDEVVAESQLPIKVTAHTPCFRSEAGSAGRDTRGMIRQ 297
                   +LIPT+EV LTN V  E++ + +LP++ TA TP FRSEAGSAGRDTRGM+RQ
Sbjct: 227 --------WLIPTAEVTLTNLVSGEILEQEKLPLRFTALTPSFRSEAGSAGRDTRGMLRQ 278

Query: 298 HQFDKVEMVQIVHPEKSYEALEQMTGHAEAVLQALELPYRVVLLCSGDMGFTAAKTYDLE 357
           HQF K E+V I   E +    E+MT  AE VL+ L L +R + LC+GDMGF+A KTYDLE
Sbjct: 279 HQFWKCELVSITDAESAVAEHERMTACAEEVLKRLGLHFRTLTLCTGDMGFSARKTYDLE 338

Query: 358 VWLPAQDTYREISSVSNCEAFQARRLQARFKNAQGK-NELVHTLNGSGLAVGRALVAVLE 416
           VWLP Q+TYREISS S C  FQARR+ AR++    K  + VHTLNGSG AVGR L+AVLE
Sbjct: 339 VWLPGQNTYREISSCSVCGDFQARRMNARYRGKDDKATKFVHTLNGSGTAVGRCLIAVLE 398

Query: 417 NHQNEDGSINVPAALRPYIGGI 438
           N+ N+DGS+ +P  L PY+GG+
Sbjct: 399 NYLNDDGSVTIPDVLLPYMGGL 420