Pairwise Alignments

Query, 322 a.a., 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.7.4) from Variovorax sp. SCN45

Subject, 348 a.a., 4-hydroxy-3-methylbut-2-enyl diphosphate reductase from Agrobacterium fabrum C58

 Score =  283 bits (725), Expect = 3e-81
 Identities = 163/322 (50%), Positives = 211/322 (65%), Gaps = 13/322 (4%)

Query: 1   MNTGISE----VILAEPRGFCAGVDRAIEIVERAIAKFGAPIYVRHEIVHNTYVVNELKA 56
           MN  +S+    + L  PRGFCAGVDRAI+IV  A+  +GAP+YVRHEIVHN YVV  L+A
Sbjct: 1   MNIAVSKPPLTIRLCGPRGFCAGVDRAIQIVVLALKAYGAPVYVRHEIVHNRYVVEGLEA 60

Query: 57  KGAIFIEELSDVPPG---ATLVFSAHGVSKAVEQEARDRGFEIFDATCPLVTKVHVEVAK 113
           KGAIF+EEL ++P       +VFSAHGV K+V ++A+ R     DATCPLV+KVH +  +
Sbjct: 61  KGAIFVEELHEIPAEHREQPVVFSAHGVPKSVPEDAQARNLFYLDATCPLVSKVHKQAMR 120

Query: 114 LAKEGYEFIMIGHKGHPEVEGTMGQLSSG-IHLVEDVADVAKVAPAQTDKLAVVTQTTLS 172
             + G   ++IGH GHPEV GTMGQL  G + LVE V D     P   + L  VTQTTLS
Sbjct: 121 HQRLGRHVVLIGHAGHPEVIGTMGQLPEGTVSLVETVEDAGVYEPVDRENLGFVTQTTLS 180

Query: 173 VDDAAEIAAAVRARFPAVREPKQQDICYATQNRQDAVKIMSPQVDLVIVVGSPTSSNSNR 232
           VDD A + A ++ RFPA++ P    ICYAT NRQDAVK  +P  DL IVVG+P SSNS R
Sbjct: 181 VDDTAGVIARLQERFPAIQAPAADSICYATTNRQDAVKQAAPGCDLFIVVGAPNSSNSKR 240

Query: 233 LRELAQRLGTE-SYMVDSAEELKPEWFE-GKTR-IGLTAGASAPEVLVREVIDRVRALGA 289
           L E+A R G + S +V  A E+  +W E G  R +GL+AGASAPEV+V E+I+  +A   
Sbjct: 241 LVEVALRAGAKHSVLVQRASEI--DWNEIGDIRTVGLSAGASAPEVIVDEIIEAFKARFD 298

Query: 290 VSVRKMDGIEETIKFPLPKGLK 311
            ++     +EET  F + + L+
Sbjct: 299 TTLDLAVTVEETEHFLVNRELR 320