Pairwise Alignments

Query, 403 a.a., Putative polysaccharide export protein YccZ precursor from Variovorax sp. SCN45

Subject, 379 a.a., lipoprotein required for capsular polysaccharide translocation through the outer membrane (NCBI) from Escherichia coli BW25113

 Score =  200 bits (508), Expect = 7e-56
 Identities = 120/332 (36%), Positives = 181/332 (54%), Gaps = 15/332 (4%)

Query: 75  IIPITPDLIRTQIAQRPQGV-PDGIKQLFAAPPVYTIGPGDVVGIIVYDHPELLPNAGAV 133
           + P+TP LI  Q+  RP    P+   +   A   Y +GPGDV+ + V+DHPEL   AG  
Sbjct: 52  VYPLTPRLI-DQLRPRPNVARPNMTLESEIANYQYRVGPGDVLNVTVWDHPELTTPAGQY 110

Query: 134 IAQQSDPTGVTVAPGFIVDAKGEIFFPYIGRTKVQGLTESGASELVARRIKAFVKDPQVS 193
             + S  TG  V P       G +F+PYIG+  V G T +     +  R+  ++ DPQV 
Sbjct: 111 --RSSSDTGNWVQPD------GTMFYPYIGKVHVVGKTLAEIRSDITGRLATYIADPQVD 162

Query: 194 VRIQSFRSQRAYVQGEVRTPGLQIFTDVPMTLSEAISRAGSFTQLGDRSHITLTRGGVST 253
           V I +FRSQ+AY+ G+V   G Q  T+VP+T+ +AI+ AG  T   D  ++ LT  G   
Sbjct: 163 VNIAAFRSQKAYISGQVNKSGQQAITNVPLTILDAINAAGGLTDTADWRNVVLTHNGREE 222

Query: 254 ELNLPMLQAMGVDGNGIPLRNGDIVNVGTREDNRVYVMGEVRAPSALQMRLNGRLSLNEA 313
            ++L  L   G       L  GDI+ V   +D +V+VMGEV+  S L+M  +G ++L EA
Sbjct: 223 RISLQALMQNGDLNQNRLLYPGDILYVPRNDDLKVFVMGEVKKQSTLKMDFSG-MTLTEA 281

Query: 314 LGDVGGPDLTTADPGQIYVVR----NSPDNSGVPQVFNLNAKNPVALALADRFELQPRDV 369
           LG+  G D+TT++   I+V+R        N  +  ++ L+  +  +L +A  F LQP DV
Sbjct: 282 LGNAEGIDMTTSNASGIFVIRPLKGEGGRNGKIANIYQLDMSDATSLVMATEFRLQPYDV 341

Query: 370 VYVDHVPLATWSRVFSLILPSAQVINLARDTA 401
           VYV   P++ W+R+ + +LP+   +    DTA
Sbjct: 342 VYVTTAPVSRWNRLINQLLPTISGVRYMTDTA 373