Pairwise Alignments

Query, 403 a.a., Putative polysaccharide export protein YccZ precursor from Variovorax sp. SCN45

Subject, 869 a.a., Periplasmic protein involved in polysaccharide export from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 52.4 bits (124), Expect = 5e-11
 Identities = 61/262 (23%), Positives = 114/262 (43%), Gaps = 33/262 (12%)

Query: 85  TQIAQRPQGVPDGIKQLFAAPPVYTIGPGD--VVGIIVYDHPELLPNAGAVI--AQQSDP 140
           T+  Q+ + V D     F    ++T+  GD   +G ++  +   +   GAV      +  
Sbjct: 371 TRFTQKEKTVSDIYNGQFG---IFTVKAGDEYTIGTVLNRYNNRVQLKGAVFRAGNYALS 427

Query: 141 TGVTVAPGFIVDAKGEIFFPYIGRTKVQGLTESGASELVARRIKAFVK-DPQVS------ 193
            G+T++   I  A G     Y+ R  +    E  ++ ++   +KA +  D  VS      
Sbjct: 428 EGLTLSQ-LITRADGLRGDAYLDRASILRTHEDLSTSVIPVNLKAVMAGDQDVSLEADDI 486

Query: 194 VRIQSFRSQR----AYVQGEVRTPGLQIFTDVPMTLSEAISRAGSFTQLGDRSHITLTR- 248
           +RI S    +      + GEVR PG+  +++  MT  + I +AG FT+   R  + + R 
Sbjct: 487 IRISSIYDLKDEYYLKISGEVRDPGIYPYSE-GMTAEDLIQQAGGFTESASRQDVEIARR 545

Query: 249 -------GGVSTELNLPMLQAMGVDGNGIPLRNGDIVNVGTRE----DNRVYVMGEVRAP 297
                  G ++  + + +   + +DGN I L+  D + V  +     +  V V G+V AP
Sbjct: 546 IQDGRENGEIAELIPVNLQDGLAIDGNAISLKPYDNLIVRRKPNFALERIVQVQGQVNAP 605

Query: 298 SALQMRLNGRLSLNEALGDVGG 319
               +R +    +++ +G  GG
Sbjct: 606 GEFALR-DTEERISDVIGRAGG 626



 Score = 45.1 bits (105), Expect = 8e-09
 Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 40/257 (15%)

Query: 103 AAPPVYTIGPGDVVGIIVYDHPELLPNAGAVIAQQSDPTGVTVAPGFIVDAKGEIFFPYI 162
           A P  Y +GPGD++ + VY   E    +             T+ P      +G +    I
Sbjct: 157 ATPSSYVLGPGDLLYVDVYGASENYYES-------------TITP------EGNLILENI 197

Query: 163 GRTKVQGLTESGASELVARRIKAFVKDPQ-------VSVRIQSFRSQRAYVQGEVRTPG- 214
           G   + GL+ S A+++V  R+  F  D Q       + + + + RS + ++ GE+R PG 
Sbjct: 198 GPIGLSGLSISEATKVVKNRLSRFYADMQGDNPSTFMQLSLGNVRSIKVHLVGELRLPGT 257

Query: 215 --LQIFTDVPMTLSEAISRAGSFTQLGDRSHITLTRGG--VSTELNLPMLQAMGVDGNGI 270
             L  F+    T+  A+  AG     G   +I + R    V+T      L   G    G 
Sbjct: 258 FTLSAFS----TVFNALYAAGGPNTNGTMRNIKVFRNNQQVATVDAYDFL-VNGKANMGF 312

Query: 271 PLRNGDIVNVGTREDNRVYVMGEVRAPSALQMRLNGRLSLNEALGDVGGPDLTTADPGQI 330
            L++ D++ V     +RV + G V+ P   +++     +  + L   GG     A   ++
Sbjct: 313 QLQDQDVIMVEPYA-SRVTLRGAVKRPMTFEVQPGE--TFEDVLAFAGG-FTDNAYTNKV 368

Query: 331 YVVRNSPDNSGVPQVFN 347
            V R +     V  ++N
Sbjct: 369 SVTRFTQKEKTVSDIYN 385



 Score = 28.9 bits (63), Expect = 6e-04
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 206 VQGEVRTPGLQIFTDVPMTLSEAISRAGSFTQLGDRSHITLTR 248
           VQG+V  PG     D    +S+ I RAG  T     +  TL R
Sbjct: 598 VQGQVNAPGEFALRDTEERISDVIGRAGGLTGYAYPAGATLIR 640