Pairwise Alignments

Query, 275 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 266 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score = 94.0 bits (232), Expect = 3e-24
 Identities = 72/246 (29%), Positives = 121/246 (49%), Gaps = 7/246 (2%)

Query: 13  SALLLGTVAHADQLADIKKKGELVVGVLGTDEPATFIDPKTRQIVGYEVDLVNAIAKKIG 72
           +AL+  T A A  + D  K+G L VG+  T  P    + K  +I+G+EVD++ A+AK +G
Sbjct: 14  TALVAVTAAQAGAIDDAVKRGTLRVGMDPTYMPFQMTN-KRGEIIGFEVDILKAMAKSMG 72

Query: 73  VKPVLKQIAVAARIPELQQGHVDLVAAGLTHNKEREAQIDFSLTTFVTGQKAIVKKD--S 130
           VK      A    IP L     D++ +G+T  +ER  +++FS    V GQ  +++K+   
Sbjct: 73  VKFEAVSTAYDGIIPALLTDKFDMIGSGMTLTQERNLRLNFSEPFIVVGQTLLIRKELAG 132

Query: 131 GITEVPQLAGKKV-LTIR-GGTQEPNIRKAVPNVDVVTFDTSQQAFQALQQGKGVGYVDD 188
            I     L  +K  LT + G T E   +K +       +D  Q+A   +  GK   +V D
Sbjct: 133 EIKSYKDLNNEKYRLTSKLGTTGEMVSKKLISKAKYHGYDNEQEAVMDVVNGKADAFVYD 192

Query: 189 EAALLRSYAKLGPQKAQYVVLKQNLSTEALAIGIKKGETALKAVVDDTLRELEKSGEAEK 248
               + +  K G  K  +  L +  + E LA G+KKG+      +++ L +++  G  ++
Sbjct: 193 APYNVVAVDKAGAGKLLF--LDEPFTYEPLAFGLKKGDYDSINFINNFLHQIKHDGTYDR 250

Query: 249 IFIKWY 254
           I  KW+
Sbjct: 251 IHDKWF 256