Pairwise Alignments

Query, 275 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 302 a.a., glutamate/aspartate ABC transporter substrate-binding protein GltI from Escherichia coli ECRC62

 Score =  112 bits (279), Expect = 1e-29
 Identities = 89/273 (32%), Positives = 133/273 (48%), Gaps = 22/273 (8%)

Query: 1   MRLNLIAAAAAASALLLGTVAHADQLAD--------IKKKGELVVGVLGTDEPATFIDPK 52
           M+L   A A  A AL  G +A AD  A         I K G +VVG   +  P ++ D +
Sbjct: 1   MQLRKPATAILALALSAG-LAQADDAAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQ 59

Query: 53  TRQIVGYEVDLVNAIA---KKIGVKPVLK----QIAVAARIPELQQGHVDLVAAGLTHNK 105
            +++VGY  D  NAI    KK   KP L+     I    RIP LQ G  D      T+N 
Sbjct: 60  -QKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNV 118

Query: 106 EREAQIDFSLTTFVTGQKAIVKKDSGITEVPQLAGKKVLTIRGGTQEPNIRK----AVPN 161
           ER+ Q  FS T FV G + + KK   I +   L GK V+   G T E  + K       N
Sbjct: 119 ERQKQAAFSDTIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMN 178

Query: 162 VDVVTFDTSQQAFQALQQGKGVGYVDDEAALLRSYAKLGPQKAQYVVLKQNLSTEALAIG 221
           + +++      +F+ L+ G+ V ++ D+A L    AK   +   + ++ +  S EA    
Sbjct: 179 MRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAK-AKKPDNWEIVGKPQSQEAYGCM 237

Query: 222 IKKGETALKAVVDDTLRELEKSGEAEKIFIKWY 254
           ++K +   K ++DDT+ +++ SGEAEK F KW+
Sbjct: 238 LRKDDPQFKKLMDDTIAQVQTSGEAEKWFDKWF 270