Pairwise Alignments

Query, 231 a.a., Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 319 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  117 bits (294), Expect = 2e-31
 Identities = 73/208 (35%), Positives = 113/208 (54%), Gaps = 10/208 (4%)

Query: 18  LVAGLLLSLQLLAAALVLALPIALVVALLRLSPFAPLRWLGFAYVESIRNIPLLAHMLFW 77
           L+ GL  +L L   + +L L I L   L RLS    LR L   YVE +R  PLL  +  +
Sbjct: 117 LMWGLWTTLWLSVVSGILGLIIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIFIF 176

Query: 78  YFGAPELLPEGIKQWLYAGHIEAFSAVIALALYTAAFMAEDIRSGIRAIPTVQFEAGRAM 137
           YF    +L               F+ + AL+L+T A++AE +R+G+++I   Q EA R++
Sbjct: 177 YFFIGTVLNLS----------REFAGIAALSLFTGAYVAEIVRAGVQSITRGQNEAARSL 226

Query: 138 GFSYLATMRRVVLPQALRVTVPPLISQTLSLWKNTSIATVIGVAELMYQAGQVESATFRS 197
           G S   +MR VVLPQA +  +PPL  Q +SL K+TS+ +VI + EL+    +V + +F  
Sbjct: 227 GLSASQSMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSP 286

Query: 198 FESFAFASAAYLTVSLAITGLATWYHHR 225
           FE     +  YL ++L ++ +A+    R
Sbjct: 287 FEILFCVAGLYLLINLPLSKMASRLERR 314