Pairwise Alignments

Query, 529 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

 Score =  211 bits (538), Expect = 4e-59
 Identities = 163/531 (30%), Positives = 256/531 (48%), Gaps = 49/531 (9%)

Query: 18  ALFAQRPGLILEERSWTWREIDERVDALVQALHSLGMRPGHKLLVQSRNNLALFESCWAA 77
           AL ++  GL      ++WR++ E+V+   +AL +LG+  G ++ + S N         A+
Sbjct: 36  ALVSRHQGL-----RYSWRQLAEQVEIYARALIALGVNTGDRVGIWSPNCAQWCILQLAS 90

Query: 78  FRLGAVWVPVNFRLTPPEVAYLGSASEATVMLAEDCF------------------AAHVD 119
            ++GA+ V +N      E+ Y+   S    ++  + F                  AA  +
Sbjct: 91  AKVGAILVNINPAYRVGELEYVLRQSGCRWLVCAEAFKTSDYHTMVQELVPELASAAPGE 150

Query: 120 AVRGASTHLAQVVTI-GTPRAGEHGYEALLAAHAGAPKAVA------DVEADTPAWYFYT 172
                   L  V+++   P AG   + A  A  AG     A       ++ D P    YT
Sbjct: 151 LASECLPELRGVISLAANPPAGFLPWHA-FAERAGQTSVEACTARQQSLQFDQPVNIQYT 209

Query: 173 SGTTGKPKAAVLTHGQL---AFVVTNHLADLIPGTTEKDCSIAVAPLPHGAG-IHALLNV 228
           SGTTG PK A L+H  +    F+V   L     G T +D  +   PL H  G + A L  
Sbjct: 210 SGTTGAPKGATLSHYNILNNGFMVGESL-----GLTARDRMVIPVPLYHCFGMVMANLGC 264

Query: 229 ARGAATVLPPSDRLEPRSFWALVERHRVSNVFTVPTIVKMLVEDASVDEFDHRSLRYLIY 288
               +T++ P+D  +       V   R + ++ VPT+   +++  S    D  +LR  I 
Sbjct: 265 ITHGSTMIYPNDAFDAELTLRAVAEERATILYGVPTMFIAMLDHPSRAHMDLSTLRSGIM 324

Query: 289 AGAPMYRADQKRALQKLGPVLVQY-FGLGEVTGCITVLPPSMHSPDDADANAHVGSCGRP 347
           AGA       +R + ++    VQ  +G+ E +      P S+ +  D D    V + GR 
Sbjct: 325 AGATCPIEVMRRVIDQMHMAEVQIAYGMTETS------PVSLQTGPDDDLELRVTTVGRT 378

Query: 348 RTGMEVAILDAQMQRLPTGEVGEICCRGPAVFAGYFDNPEATAKAL-RGGWFHTGDLGRM 406
           +  +E  ++DA    +P GE+GE+C RG +V  GY+DNP+ATA A+   GW H+GDL  M
Sbjct: 379 QPQLENKLVDADGCIVPRGEIGELCTRGYSVMLGYWDNPQATADAIDPAGWMHSGDLAVM 438

Query: 407 DAQGLLYITGRESDMYISGGSNVYPREVEEILLTHPAVREAAVLGVPDAKWGEVGVA-VL 465
           D QG + I GR  DM I GG N+YPRE+EE   THPAV +A V+G+P +++GE  VA + 
Sbjct: 439 DEQGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEIVAWIK 498

Query: 466 VCGQDAPTPEDILAHLDGRCARYRWPRHVFFWDSLPKSGYGKVTKNEIRRL 516
           +    + T E++      R A ++ PR++ F D  P +  GKV K  +R +
Sbjct: 499 LHPGHSATVEELQGWCKARIAHFKVPRYIRFVDEYPMTVTGKVQKFRMREI 549