Pairwise Alignments

Query, 529 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 515 a.a., long-chain-fatty-acid--CoA ligase from Pseudomonas putida KT2440

 Score =  275 bits (703), Expect = 3e-78
 Identities = 175/508 (34%), Positives = 272/508 (53%), Gaps = 6/508 (1%)

Query: 8   NLSVLLSQTAALFAQRPGLILEERSWTWREIDERVDALVQALHSLGMRPGHKLLVQSRNN 67
           NL  L S++A  + +R  +I      T+ ++++R + L  AL + G+  G  + + + N 
Sbjct: 2   NLGTLSSRSARYWPERLAVIDRHTRLTFAQLEQRANQLASALLAQGIATGEHVAILAPNR 61

Query: 68  LALFESCWAAFRLGAVWVPVNFRLTPPEVAYLGSASEATVMLAEDCFAAHVDAVRGASTH 127
             L E+  A ++ G V VPVN RL P EV  + + + +  ++A+   A  + A R     
Sbjct: 62  AELVEAEVAFYKAGLVKVPVNARLAPDEVIQVLNDACSVALIADAQLAQALLARRQEVPA 121

Query: 128 LAQVVTIGTPRAGEHGYEALLAAHAGAPKAVADVEADTPAWYFYTSGTTGKPKAAVLTHG 187
           L  +VT+G  R G+  Y ALLA  +  P +  D+  D  A   YTSG++G  KAA+L+ G
Sbjct: 122 LRLIVTLGE-RGGDITYAALLAQGSSQPIS-CDLPDDALAVLHYTSGSSGVLKAAMLSVG 179

Query: 188 QLAFVVTNHLADLIPGTTEKDCSIAVAPLPHGAGIHALLNVARGAATVLPPSDRLEPRSF 247
               ++   LA         D    V P+ H +G+  +  +A GA  +L   +R + +  
Sbjct: 180 NRKALIRKSLASPTRRAAPGDVMAHVGPITHASGMQLMPLLAVGACNLL--LERYDDQLL 237

Query: 248 WALVERHRVSNVFTVPTIVKMLVEDASVDEFDHRSLRYLIYAGAPMYRADQKRALQKLGP 307
              ++R  V+ +F VP ++  LV    V+ +D  SLR ++Y  APM  A  KRA++  GP
Sbjct: 238 LETIQREGVTRLFLVPAMINRLVNFPDVERYDLSSLRLVMYGAAPMAPALVKRAIEVFGP 297

Query: 308 VLVQYFGLGEVTGCITVLPPSMHSPDDADANAHVGSCGRPRTGMEVAILDAQMQRLPTGE 367
           +L Q +G GE    +TVL    H  +  D    + SCGR     ++ +++   Q +  GE
Sbjct: 298 ILAQGYGAGETCSLVTVLTEQDHLCEGGDYR-RLASCGRCYFETDLRVVNDHFQDVQPGE 356

Query: 368 VGEICCRGPAVFAGYFDNPEATAKALRGGWFHTGDLGRMDAQGLLYITGRESDMYISGGS 427
           VGEI  +GP +  GY+  P  TA+ +R G++ TGDL  +D QG ++I  R+ +M ISGG 
Sbjct: 357 VGEIVVKGPDIMQGYWRAPHLTAEVMRDGYYLTGDLATVDEQGYVFIVDRKKEMIISGGF 416

Query: 428 NVYPREVEEILLTHPAVREAAVLGVPDAKWGEVGVAVLVCGQD-APTPEDILAHLDGRCA 486
           N+YP EVE++L + P V EAAV+GVPD +WGE   AV+V     A   +D++ H     A
Sbjct: 417 NIYPSEVEQVLYSMPQVFEAAVVGVPDEQWGEAVRAVIVLKPGMALQEQDVIEHCAQALA 476

Query: 487 RYRWPRHVFFWDSLPKSGYGKVTKNEIR 514
            ++ PR V F   LPK+  GKV +  IR
Sbjct: 477 GFKKPRAVDFVSELPKNPNGKVVRRLIR 504