Pairwise Alignments

Query, 646 a.a., Predicted gluconate TRAP family transporter, DctM subunit from Variovorax sp. SCN45

Subject, 425 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Variovorax sp. SCN45

 Score =  200 bits (508), Expect = 1e-55
 Identities = 124/427 (29%), Positives = 208/427 (48%), Gaps = 25/427 (5%)

Query: 229 VFFVGVVLACVLCGIPIAFAFGLGTFGYLALTTDTALPVIIGRMDEGMSHLILLAVPLFV 288
           V  V  ++ C    I +A + GL +   + +T    L + +  M   ++   L A+P F+
Sbjct: 3   VVMVATMVLCFALSISVAVSIGLASILGIQVTNANML-ISVKEMFNSINKFPLAAIPFFI 61

Query: 289 FLGLLIEMTGMAKAMVAFLASLLGHVKGGLSYVLVGAMYLVSGISGSKAADMAAIAPALF 348
             G L+E  G+++ +V F  S++G V+GGL    V    + + +SGS  A   AI   L 
Sbjct: 62  LAGNLMETGGISRRLVEFAKSIVGGVQGGLPMTCVLTCMIFAAVSGSSVATTFAIGAILI 121

Query: 349 PEMKKRGADEGELVALLAATGAQTETVPPSLVLITIGSVTGVSIAALFTGGLLPAVILGL 408
           P + K G       AL A +      +PPS+ +I  G    VSI  LF  G  P +++ L
Sbjct: 122 PALIKHGYPTSYAAALQATSAELGVIIPPSIPMILYGVSAEVSIGELFIAGFGPGILISL 181

Query: 409 MLCVVVFM--------RNRHEDLSQVARPPWKQVMRLALVALPALALPFVIRAAVVEGVA 460
            L + V++        +N  E      R  W+        A  AL +P +I   +  GV 
Sbjct: 182 ALMLFVWVYCKWKGWGKNDGEGRMPFGRALWQ--------AGWALLMPVIILGGIYGGVF 233

Query: 461 TATEVSTIGIVYAVVAGLVVYRQFDWRRLGPMLVATASLSGAILLIIGTATAMAWGLTQS 520
           T TE S + + YA+V G+V+YR+   + L  +L  +   S  I+ II  A   A+ +T++
Sbjct: 234 TPTEASAVAVFYALVVGMVIYREIKLKDLYVILRKSVMSSAVIMFIIANAGLFAFLITRA 293

Query: 521 G----FSRWLAEAMASLPGGAPMFLAVSLVTFVVLGSVLEGIPAIVLFGPLLFPIARQLG 576
           G       WL + + S      MFL        V+G  +E   AI++  P+L P+A   G
Sbjct: 294 GVPDAIGHWLQQVLQS----PAMFLLGVNAALFVIGMFIETSAAIIVLAPILAPVAVHFG 349

Query: 577 IHEVHYAMVVVLSMGLGLFAPPLGVGYYAACAIGRVRPDAGIRPIVGYMLALLVGTIAVA 636
           I  VH+ +++V+++ LG+  PP GV  +AAC + R+  D  +R +V ++L ++   + + 
Sbjct: 350 IDPVHFGLIMVVNLALGMITPPFGVNLFAACTVARISLDRIVRHLVPFVLVIMACLMVIT 409

Query: 637 AIPWLSI 643
            +PW+S+
Sbjct: 410 YVPWVSL 416