Pairwise Alignments

Query, 646 a.a., Predicted gluconate TRAP family transporter, DctM subunit from Variovorax sp. SCN45

Subject, 606 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  219 bits (558), Expect = 3e-61
 Identities = 170/606 (28%), Positives = 291/606 (48%), Gaps = 35/606 (5%)

Query: 36  EANPASFTSRTEHVLGVLVDGLAAALVLADVAVLLAGVVARFVLHQPLIWSDELASMLFI 95
           E   A   SR + VLG +   + AAL+L    V+L  V  R++ H   I +++L   L +
Sbjct: 13  ETAAAVMLSRFDAVLGAVAALILAALLL----VVLINVTLRYLFHTGFIGAEDLGIWLNV 68

Query: 96  WLAMLGAVVALRRGEHMRMTAMVSKLPPQRRRLAEAIALYAALAFLAMVAWPAWEYASEE 155
            +  +GA ++L+    MR+   V  LPP+     E +A   +     ++A    E A+  
Sbjct: 69  AMIAVGAPLSLKSALAMRLDVFVRFLPPRFHAATEILADAFSFVAALILALGGVEIAAML 128

Query: 156 RFITTPALDISNAWRAAALPVGVVLMGMFAVLRLFRDFDWKTSTKAFAVVVTL---ILAF 212
              T+P L +    R   L  G  L+ ++  L+ F +       K FAV++++   ++A+
Sbjct: 129 GG-TSPTLGLPEWVRFGFLGAGGALIFVYLTLQRFSE------GKTFAVLLSMTIALVAY 181

Query: 213 TLGRAVFEDL----GRLNLLVFFVGVVLACVLCGIPIAFAFGLGTFGYLALTTDTALPVI 268
                +F D          L   VG+VLA      P+A AF    +  +A  +    P I
Sbjct: 182 VGLPQIFVDTTLPPSLFLALTAAVGLVLAA-----PLAHAFLAAAYVAIAFGSTLPEPAI 236

Query: 269 IGRMDEGMSHLILLAVPLFVFLGLLIEMTGMAKAMVAFLASLLGHVKGGLSYVLVGAMYL 328
           +     GMS  +LLA+P F+  G L+ ++G+A  +V F AS++GH + GL+   +    L
Sbjct: 237 VSSTVTGMSKFLLLAIPFFLLAGSLLTISGVANQLVRFAASVVGHRRAGLAQTTLLTSVL 296

Query: 329 VSGISGSKAADMAAIAPALFPEMKKRGADEGELVALLAATGAQTETVPPSLVLITIGSVT 388
            SG SGS  A+ A  A    PE+ K G    +  A++AAT      +PPS+  + + + T
Sbjct: 297 FSGASGSSVANAAFGASTFQPELVKHGYPPAQAGAIIAATSVLDNVIPPSIAFLILATAT 356

Query: 389 GVSIAALFTGGLLPAVILGLMLCVVVFMRNRHEDLSQVARPPWKQVMRLALVALPALALP 448
            +S+ +L  GG     ++ + L V + +  R  D   + R    +  R A+ A+PA  L 
Sbjct: 357 NLSVGSLLVGGFFAGGLMAVCLGVAIHLSVRSVD--TLPRATGAERWRSAIAAIPAFGLG 414

Query: 449 FVIRAAVVEGVATATEVSTIGIVYAVVAGLVVYRQFDWR----RLGPMLVATASLSGAIL 504
            ++   +  G+ T TE + +  +Y ++ G      F +R    R+      +A  + AI 
Sbjct: 415 VIVVVGIRIGIVTTTEAAALAALYTLLLG------FGYRLGVGRIFATFRQSAGEAAAIG 468

Query: 505 LIIGTATAMAWGLTQSGFSRWLAEAMASLPGGAPMFLAVSLVTFVVLGSVLEGIPAIVLF 564
           L+IGTA   A+ L     S  + + +  L G     L +S +  + +G VL+   AI+LF
Sbjct: 469 LLIGTAGPFAFLLAVDNVSGLVTDFVTVLGGSKITVLLLSNLILLAVGLVLDIGAAILLF 528

Query: 565 GPLLFPIARQLGIHEVHYAMVVVLSMGLGLFAPPLGVGYYAACAIGRVRPDAGIRPIVGY 624
           GP+L P A   GI  +H+ +++V+++ +    PPLG+  +    + RV   A  R ++ Y
Sbjct: 529 GPILLPAAVAAGIDPIHFGVILVVNLMIHGLTPPLGMLIFVVSGVTRVPAAALFRAVIPY 588

Query: 625 MLALLV 630
           +++LLV
Sbjct: 589 LVSLLV 594