Pairwise Alignments

Query, 445 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

Subject, 438 a.a., shikimate transporter (NCBI) from Escherichia coli BW25113

 Score =  168 bits (425), Expect = 4e-46
 Identities = 122/416 (29%), Positives = 199/416 (47%), Gaps = 25/416 (6%)

Query: 37  AVGVIIGRASEYFDFFVYGIASVLVFPAVFFPFEQHLEGVLYSFLIFSFAFIARPFGTVI 96
           A+G   G   +++DF +YGI + LVF   FFP      G L +F  F   F+ RP G VI
Sbjct: 24  ALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVI 83

Query: 97  SMAIQRRFGREAKLTLALFVLGTSTAGIAFLPGYASLGFTAIVLLSVFRFGQGLALGGSW 156
                 R GR+  L L ++++G +TA I  LP ++++G+ A +LL   R  QG A+GG W
Sbjct: 84  FGHFGDRLGRKRMLMLTVWMMGIATALIGILPSFSTIGWWAPILLVTLRAIQGFAVGGEW 143

Query: 157 DGLPSLLALNAPANRRGWYAMLGQLGAPIGFFIASALFAYLYSSLPSEDFLDWGWRYSFY 216
            G   L   +AP N++ +Y+   Q+G  +G  +++ L + +      E FL WGWR  F 
Sbjct: 144 GGAALLSVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFL 203

Query: 217 VAFAINVVALFARLRLVATDEYSRLLEERELEPTSVTELVGSQGSNILIGAFAALASYAL 276
            +  + + AL+ R  +  + E+    +++  +  +   +   +      GAF  + +  L
Sbjct: 204 FSIVLVLGALWVRNGMEESAEFE---QQQHYQAAAKKRIPVIEALLRHPGAFLKIIALRL 260

Query: 277 FHLITVFPLSWITL-YSDQSV----TEFLVVQMVGAVLGAAGIVASGLLADRIGRR--FT 329
             L+T++ ++   L YS Q++      FL + ++   L    I     LADR GRR  + 
Sbjct: 261 CELLTMYIVTAFALNYSTQNMGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYI 320

Query: 330 LGGLAAVIAAFSGFAPTLLDGGRIGQDIFILVGFVILGLSYGQ------AAGAVTSNFAP 383
            G L   ++AF  F           Q IF +V F I+  +              T  F  
Sbjct: 321 TGTLIGTLSAFPFFM------ALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGA 374

Query: 384 KYRYVGAALTADVAWLIGAAFAPLVALGLSAHFGLAY--VSVYLLSGA-VATLAAL 436
            YRY GA +   VA ++G  F P +A  L  +F   +  V++YLL+G  ++ + AL
Sbjct: 375 SYRYSGAGVGYQVASVVGGGFTPFIAAALITYFAGNWHSVAIYLLAGCLISAMTAL 430