Pairwise Alignments

Query, 356 a.a., Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) from Variovorax sp. SCN45

Subject, 375 a.a., cytochrome c oxidase subunit 2 from Pseudomonas putida KT2440

 Score = 60.5 bits (145), Expect = 7e-14
 Identities = 59/257 (22%), Positives = 99/257 (38%), Gaps = 41/257 (15%)

Query: 60  TVLMLIIIIPVIALTIFFAWRYRQSNKEATYSPDWDHSTQLELAIWAAPLLIIIALGAIT 119
           T+  + +II ++     F             +  +   T +E+     P LI++ + AI 
Sbjct: 45  TIFWICVIIGIVVFGAMFWSMVIHRRSTGQQAAHFHEHTWVEILWTVVPFLILVVM-AIP 103

Query: 120 WISTHVLDPYQPLRRLDAQRPIPADTKPLVVEVVALDWKWLFIYPEQGIATVNELAAP-- 177
              T ++D Y             A    + V+V    WKW + Y  Q +   + LA P  
Sbjct: 104 ATKT-LIDIYD------------ASESDIDVQVTGYQWKWHYKYLGQDVEFFSNLATPTD 150

Query: 178 ---------------VDRP--------ISFKITASSVMNSFFIPALAGQIYAMPGMETKL 214
                          VD+P        + F +TA+ V++S+++PA A +  A+PG   + 
Sbjct: 151 QIHNKAPKDEHYLLEVDQPLVLPVGAKVRFLVTAADVIHSWWVPAFAVKRDAIPGFVNEA 210

Query: 215 HAVINKPGEFDGFSANYSGAGFSGMRFKFHGLSDGDFDQWV--QKVKSGKDGELTRELYK 272
              I KPG + G      G     M       S  D+D W+  +K ++ K  ELT + + 
Sbjct: 211 WTRIEKPGIYRGQCTELCGKDHGFMPVVVEVKSKADYDTWLGERKAEAAKLKELTSKEWT 270

Query: 273 KLEAPSEREPVRHYAAV 289
             E     + V H   V
Sbjct: 271 LEELVERGDKVYHTTCV 287