Pairwise Alignments

Query, 667 a.a., Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) from Variovorax sp. SCN45

Subject, 569 a.a., cytochrome-c oxidase chain I from Agrobacterium fabrum C58

 Score =  409 bits (1052), Expect = e-118
 Identities = 216/534 (40%), Positives = 309/534 (57%), Gaps = 28/534 (5%)

Query: 58  WITSIDHKKIGIMYIILGLVMLLRGFADALMMR--------------AQQAMAFGDNAGF 103
           W  S +HK IG +Y+I  ++  + G   +++MR              A     F  +A  
Sbjct: 40  WFLSTNHKDIGTLYLIFAIMAGIIGGGLSVVMRMELQEPGIQIFHGLASMVYGFEGDAAI 99

Query: 104 LPPHHYDQVFT-AHGVIMIFFVAMP-LVTGLMNFVVPLQIGARDVAFPFLNNFSFWMTTF 161
               H   VFT AH +IMIFF+ MP ++ G  N+++P+ IGA D+AFP LNN SFW+   
Sbjct: 100 DGGKHMFNVFTTAHALIMIFFMVMPAMIGGFANWMIPIMIGAPDMAFPRLNNISFWLIVP 159

Query: 162 GAGLVMASLFVGEFAKT-----GWLAYPPLSGILYSPDVGVDYYIWSLQIAGVGTLLSGV 216
              L++ SLFV   A       GW  YPPLS     P   VD  I+SL +AG  ++L  +
Sbjct: 160 AFILLLLSLFVEGPAGAYGVGGGWTMYPPLS-TSGMPGPAVDLAIFSLHVAGASSILGAI 218

Query: 217 NLLATIVKMRAPGMTMMKMPVFTWTALCTNVLIVAAFPVLTAVLALLSLDRYAGTNFFTN 276
           N + TI+ MRAPGMT+ KMP+F W+ L T  L++ + PVL   + +L  DR  GT FF+ 
Sbjct: 219 NFITTILNMRAPGMTLHKMPLFAWSVLVTAFLLLLSLPVLAGGITMLLTDRNFGTAFFSP 278

Query: 277 DMGGNAMMYVNLIWIWGHPEVYILILPAFGIFSEVVSTFSGKRLFGYASMVYATVVITIL 336
           + GG+ ++Y +L W +GHPEVYILILP FGI S +VSTFS K +FGY  M YA V I  +
Sbjct: 279 EGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSKKPVFGYLGMAYAMVAIGAV 338

Query: 337 SYLVWLHHFFTMGSGASVNSFFGITTMIISIPTGAKIFNWLFTMYRGRIRFELPMMWTIG 396
            ++VW HH +T+G       +F   TM+I++PTG KIF+W+ TM+ G + F  PM+W IG
Sbjct: 339 GFIVWAHHMYTVGLSLEAQRYFVFATMVIAVPTGIKIFSWIATMWGGSLTFSTPMVWAIG 398

Query: 397 FMITFVIGGMTGVLLAVPPADFVLHNSLFLIAHFHNVIIGGVLFGMLAGITYWFPKAFGY 456
           F+  F +GG+TGV LA    D  LH++ +++AHFH V+  G +F + AG  YWFPK  GY
Sbjct: 399 FIFLFTVGGVTGVQLANAGLDRSLHDTYYVVAHFHYVLSLGAVFAIFAGWYYWFPKITGY 458

Query: 457 KLDPFWGKCSFWFWIVGFWFAFMPLYILGLMGVTRRMSHFQDMSLQIWFQVAAFGAVLIA 516
             + F GK  FW   +G    F P + LGL G+ RR   + D +   W  V+++G+ + A
Sbjct: 459 MYNEFIGKLHFWVMFIGVNLIFFPQHFLGLAGMPRRYIDYPD-AYAGWNMVSSYGSYISA 517

Query: 517 LGIASFIIQLVVSFIRRESLRDTTGDPW--NGRTLEWSTSSPPPAYNFAFTPRV 568
           + +  F+  +  +F ++   R    +PW     TLEW  SSPPP + +   PR+
Sbjct: 518 VAVGIFLFGVWEAFAKK---RIAGNNPWGEGATTLEWQLSSPPPYHQWEQLPRI 568