Pairwise Alignments

Query, 838 a.a., ABC transporter, fused permease protein from Variovorax sp. SCN45

Subject, 832 a.a., putative ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  509 bits (1310), Expect = e-148
 Identities = 315/842 (37%), Positives = 464/842 (55%), Gaps = 30/842 (3%)

Query: 7   LGWRTLWRDLRAGELRLLIVAVLLAVAALTAVGFFADRLKGGLQRDARQLLGGDAVVVSD 66
           L  R L RD+RA E+R+L  A+L+AVAA TA+G+F  RL G +Q  A + LG D V+   
Sbjct: 9   LALRQLLRDVRASEVRVLFFALLVAVAASTAIGYFGARLNGAMQLRASEFLGADLVLQGS 68

Query: 67  NPTPDAFVAQAKSLGLEGTGTYGFPTMARAEDAQGGASKLVALKAVTAGYPLRGSLQTSA 126
            P  +  +   K+LGL       F ++   ++      +L ++KA    YPLRG ++++ 
Sbjct: 69  APAREQQLDAGKALGLRHARVVEFTSVVGGDNG----IQLSSVKAADGAYPLRGQVRSAP 124

Query: 127 TL---DGPGAVTRDIPPAGEVWVDASLLDSLGLKIGDTLLLGDTGLRVGRVITLEPDRGA 183
                + PG      P  GEVWV+  LL +LGL IGD++ +G   LR+ RV+T EPDR  
Sbjct: 125 APYAEETPGGG----PAPGEVWVEPRLLAALGLAIGDSIDVGIKTLRMSRVLTYEPDRAN 180

Query: 184 GFMSFSPRVMLNQADVARTALVQPASRVGYRYAVAGNDAAVKRFTDWADATLKKGELRGV 243
            F S +PRVM+N AD+  T ++QP SRV YR    G+  A+ ++    +  L   +    
Sbjct: 181 NFYSLTPRVMMNLADLEATGVIQPGSRVTYRDLWRGDAEALAQYRQAVEKDLAANQ---- 236

Query: 244 RLDSFESGRPEMRQTLDRAEKFLSLVALLAALLSAVAVALAARGFAASHLDDCAMLRVLG 303
           RL     G  ++   L +AE++L++ +L+A LL+ VAVAL+A  +AA  LD  A+LR LG
Sbjct: 237 RLRDTRDGNQQIGGALGKAERYLNMASLVAVLLAGVAVALSASRYAARRLDASALLRCLG 296

Query: 304 QSQRTIAAAYTFEFAVIGVVASGLGVAIGFAVHYVFVLLLSGLVETALPAATLWPVAFGL 363
            S+      Y  + A++G+VA+  G  +G+        LL GL+ + +PA  + P   G+
Sbjct: 297 LSRHQALGLYCLQLAMLGLVAALAGALLGWLAQLGLFRLLHGLLPSVVPAGGIVPALAGI 356

Query: 364 GMGLTLLFAFGLPPVLQLARVPPLRVIRRDVGGLKPASLAVLGVGVAGFAALLMAASSDI 423
           G GL  L  F LPP+  L +VPPLRV+RRD+  +  +S  V G  +     ++   S D+
Sbjct: 357 GTGLVALAGFALPPIAALGQVPPLRVLRRDLLPIPASSWLVYGAALLALGLIMWRLSLDL 416

Query: 424 KLGLIAVGGFAGAVAVFALLSWLAVKVLRRSVNETTAPRWLVLATRQISARPAYAVVQVS 483
            L    +GG   A  +   L  L ++ LR+ +    AP    L   Q+   P  A  Q  
Sbjct: 417 LLTFALLGGGLVAALLLGGLLLLGLRSLRQLL--AGAPLTWRLGLGQLLRHPTAAAGQAL 474

Query: 484 ALAVGLLALVLLVLLRTDLVASWRQATPPDAPNRFVINVMPDQSEAFQKSLRDAGVGKFD 543
           A  + LLA+ L+ LLR +L+ +W+   P DAPN F +N++PD  E F + L         
Sbjct: 475 AFGLILLAMALVALLRAELLDTWQAQLPKDAPNHFALNILPDDREPFIQHLHQVNAASAP 534

Query: 544 WYPMIRGRLVAINDKPVTPDDYTEDRAKRLVDREFNLSNSVEAPAHNSITAGKWTP--DA 601
            YP+  GRLV IN+KPV      +   +R V R+ +L+ + E P  N +TAG W P   A
Sbjct: 535 LYPVTPGRLVQINEKPVQQVVSKDSAGERAVQRDLSLTWAAELPEGNVLTAGSWWPALPA 594

Query: 602 KNE---VSVEEGLAETLGLKLGDMLRFDIGGMQNDARITSLRKVDWGSLHANFFVMYTVA 658
            N+   VSVE  LA +L L++GD+L FDIGG Q  AR++SLR V W S   NF++++   
Sbjct: 595 DNDIPGVSVEAELASSLKLQMGDLLTFDIGGQQRQARVSSLRNVHWDSFQPNFYMIFQPG 654

Query: 659 SLADVPVTYMGAFRAPETRGFD-NALVRSYPNVTNVDMSATINQVQRVLDQVIRAVEFLF 717
           +L  +P TY+ +F        D  AL R++P VT + + A ++Q++ +L QV  AVE++ 
Sbjct: 655 TLQGLPTTYLTSFYLAPGHDLDVVALSRAFPAVTILQVDALLDQLRSILAQVTLAVEYVL 714

Query: 718 GFTLAAGLVVLFAAVTATREERAREFAVMRAVGARASLLRQVQRAELAGVGLLAGFLASI 777
            F LAAGL VLFA + AT +ER R+ A++RA+GA   LL + +R E   +G  +G LA++
Sbjct: 715 LFVLAAGLAVLFAGLQATLDERIRQGALLRALGAARPLLVKARRIEFGLLGAASGLLAAV 774

Query: 778 VASVIGWALARYVFEFSWTASP---VVPLAGALAGAVLALGAGWWGLRDVLRRPVVDTLR 834
              +I W L RY F+  W+  P   V+PL GAL    L  GAG  G R  L    +  LR
Sbjct: 775 GCELITWVLYRYAFDLQWSPHPWLLVLPLTGAL----LVGGAGVLGTRRALNASPLAVLR 830

Query: 835 RA 836
            A
Sbjct: 831 EA 832