Pairwise Alignments

Query, 635 a.a., Selenocysteine-specific translation elongation factor from Variovorax sp. SCN45

Subject, 640 a.a., selenocysteyl-tRNA-specific translation elongation factor from Pseudomonas putida KT2440

 Score =  539 bits (1388), Expect = e-157
 Identities = 308/641 (48%), Positives = 400/641 (62%), Gaps = 19/641 (2%)

Query: 1   MIIGTAGHIDHGKTTLVRALTGVDTDRLPEEKRRGISIELGYAYLHAPDGVSL-GFVDVP 59
           MI+GTAGHIDHGKT L+ ALTG   D+  EE+ RG++I+LGY Y    +G  L GF+DVP
Sbjct: 1   MIVGTAGHIDHGKTALLLALTGQAGDQRQEERARGMTIDLGYRYAALSEGAPLTGFIDVP 60

Query: 60  GHERLLHTMLAGATGIDHALLVVAADDGVMPQTREHLAVVALLGVREATVAITKIDRIDE 119
           GHER +H MLAGA GID  LLVVAADDGVMPQTREHLA++ LLG+ +A VAI+K DR++ 
Sbjct: 61  GHERFIHNMLAGAHGIDLVLLVVAADDGVMPQTREHLAIIELLGIPQALVAISKCDRVEP 120

Query: 120 SMREARLAEVRSDIAALLAPTPLAGAPMLAVSATTGEGVDTLRERLLDVASKARAREDDL 179
           S    RLAEV+  ++ LLAP P AGA    +S+ +GEGVD LR+ LL+  +  R R    
Sbjct: 121 S----RLAEVQMQVSELLAPGPYAGARQFPLSSISGEGVDALRQALLEAEAGTRQRSVVG 176

Query: 180 AFRLAVDRAFTLSGVGTVVTGTVFSGTVRIGDELRVVPGDRSVRVRGIHAQNQKAESAHA 239
            FRLAVDRAF ++G G VVTGT  +G V  GD L +    + VRVRG+HAQNQ A  A A
Sbjct: 177 GFRLAVDRAFAVTGAGVVVTGTALAGRVSAGDTLLLGKAGKVVRVRGLHAQNQAALVAEA 236

Query: 240 GQRCALALAG--VTKDEMHRGDWVCAPAIALATDRIDVLLTLWPDEAKPLRSGTTVHAHL 297
           GQR AL +A   +  +++HRGDW+    +   + R+D+ L L PDE +     + VH HL
Sbjct: 237 GQRVALNIAAERLAVEQVHRGDWLVPEWLHAPSVRVDIELYLLPDEKRAFEHFSAVHVHL 296

Query: 298 GASDVMASLALLDRDALAPGETALAQLVTKESVGAWHGDRGVLRDASATRTMAGVRVLDP 357
           G  DV A +ALL+ ++LA G+   AQL+    + A HGDR VLRD  A RT+ G +VLDP
Sbjct: 297 GTQDVTARVALLEGESLAAGQRMFAQLLLNAPLQAVHGDRLVLRDQRAQRTLGGGKVLDP 356

Query: 358 FAPVRYRRLPERLRTLAGWA-IDDRAARVAALLHNAPLGIDTARLARALS-------LPD 409
           FAP R RR   RL+ L       D    + ALL +AP GI   RL R  +       LPD
Sbjct: 357 FAPSRQRRSDARLQQLQVLRDAADLEQALPALLASAPGGISPQRLERQFNRLRETWQLPD 416

Query: 410 EAALPLPADAVRIEHTAIAQRHLDALDAQITGRLADFHHDAPDEVGPDARRLRRLAAPRT 469
           +  +     A R      A     AL  Q+  +LA FH   PD++GPD  RLRR  A   
Sbjct: 417 DVRVV----ATRQGQLLFANAQWQALKQQVLEQLARFHEQEPDQLGPDRDRLRRFVALPL 472

Query: 470 DDALWRHALDALVARGALVRSGTWLHLPDHAARLGEAEQKLAQKLLPRLADGGFDPPWVR 529
           +   +   LD L+   A+  SG WLHLPDH  +L EA+  L  +L P+L  G FDPPWVR
Sbjct: 473 ERPAFVSLLDELLDDSAIASSGPWLHLPDHKVQLSEADSALWARLQPKLIAGQFDPPWVR 532

Query: 530 DLAKDCSASEPMVRQTLASLARRGEAFQVVKDLYYPLATIERLAAIARDCLDGPEGLQAA 589
            LA + + +E  VR  L  LAR G   QVV+DL+YP AT++R+AA+        + +Q A
Sbjct: 533 TLASEENCAEADVRLLLRKLARLGLVHQVVRDLFYPEATLQRMAALMLGQASETQIVQVA 592

Query: 590 SFRDATGLGRKRAIQLLEFFDRVGLTRRVKDAHLLRPDTSL 630
           +FRD  G+GRKR++Q+LE+FDR+GLTRRV D   +R D++L
Sbjct: 593 AFRDMLGIGRKRSVQILEYFDRIGLTRRVADQRHIRADSAL 633