Pairwise Alignments

Query, 635 a.a., Selenocysteine-specific translation elongation factor from Variovorax sp. SCN45

Subject, 614 a.a., selenocysteinyl-tRNA-specific translation factor from Escherichia coli BL21

 Score =  441 bits (1134), Expect = e-128
 Identities = 281/640 (43%), Positives = 360/640 (56%), Gaps = 38/640 (5%)

Query: 1   MIIGTAGHIDHGKTTLVRALTGVDTDRLPEEKRRGISIELGYAYLHAPDGVSLGFVDVPG 60
           MII TAGH+DHGKTTL++A+TGV+ DRLPEEK+RG++I+LGYAY   PDG   GF+DVPG
Sbjct: 1   MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVPGFIDVPG 60

Query: 61  HERLLHTMLAGATGIDHALLVVAADDGVMPQTREHLAVVALLGVREATVAITKIDRIDES 120
           HE+ L  MLAG  GIDHALLVVA DDGVM QTREHLA++ L G    TVA+TK DR+D  
Sbjct: 61  HEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVD-- 118

Query: 121 MREARLAEVRSDIAALLAPTPLAGAPMLAVSATTGEGVDTLRERLLDVASKARAREDDLA 180
             EAR+ EV   +  +L     A A +   +AT G G+D LRE LL +  +  A +   +
Sbjct: 119 --EARVDEVERQVKEVLREYGFAEAKLFITAATEGRGIDALREHLLQLPEREHASQH--S 174

Query: 181 FRLAVDRAFTLSGVGTVVTGTVFSGTVRIGDELRVVPGDRSVRVRGIHAQNQKAESAHAG 240
           FRLA+DRAFT+ G G VVTGT  SG V++GD L +   ++ +RVR +HAQNQ  E+AHAG
Sbjct: 175 FRLAIDRAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRVRALHAQNQPTETAHAG 234

Query: 241 QRCALALAG-VTKDEMHRGDWVCAPAIALATDRIDVLLTLWPDEAKPLRSGTTVHAHLGA 299
           QR AL +AG   K++++RGDW+ A        R+ V L        PL     +H H  A
Sbjct: 235 QRIALNIAGDAEKEQINRGDWLLADVPPEPFTRVIVEL----QTHTPLTQWQPLHIHHAA 290

Query: 300 SDVMASLALLDRDALAPGETALAQLVTKESVGAWHGDRGVLRDASATRTMAGVRVLDPFA 359
           S V   ++LL        E  LA+LV    +     DR VLRD SA  T+AG RV+    
Sbjct: 291 SHVTGRVSLL--------EDNLAELVFDTPLWLVDNDRLVLRDISARNTLAGARVVMLNP 342

Query: 360 PVRYRRLPERLRTLAGWAIDDRAARVAALLHNAPLGIDTARLARALSLPDEAALPLPADA 419
           P R +R PE L+ LA  A     A  A  +H     ++ A  A A  L  E    L    
Sbjct: 343 PRRGKRKPEYLQWLASLARAQSDAD-ALSVHLERGAVNLADFAWARQLNGEGMREL---- 397

Query: 420 VRIEHTAIAQRHLDALDAQITGR--------LADFHHDAPDEVGPDARRLRRLAAPRTDD 471
             ++     Q     L+A +  R        LA +H    DE GP   RLRR+A P  D+
Sbjct: 398 --LQQPGYIQAGYSLLNASVAARWQRKILDTLATYHEQHRDEPGPGRERLRRMALPMEDE 455

Query: 472 ALWRHALDALVARGALVRSGTWLHLPDHAARLGEAEQKLAQKLLPRLADGGFDPPWVRDL 531
           AL    ++ +   G +     WLHLPDH A   E +Q + QK  P   D   +P WVRDL
Sbjct: 456 ALVLLLIEKMRESGDIHSHHGWLHLPDHKAGFSEEQQAIWQKAEPLFGD---EPWWVRDL 512

Query: 532 AKDCSASEPMVRQTLASLARRGEAFQVVKDLYYPLATIERLAAIARDCLDGPEGLQAASF 591
           AK+    E  +R TL   A++G    +VKD YY    I   A + RD         AA F
Sbjct: 513 AKETGTDEQAMRLTLRQAAQQGIITAIVKDRYYRNDRIVEFANMIRDLDQECGSTCAADF 572

Query: 592 RDATGLGRKRAIQLLEFFDRVGLTRRVKDAHLLRPDTSLF 631
           RD  G+GRK AIQ+LE+FDR+G TRR  + HLLR D  LF
Sbjct: 573 RDRLGVGRKLAIQILEYFDRIGFTRRRGNDHLLR-DALLF 611