Pairwise Alignments

Query, 309 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  150 bits (378), Expect = 4e-41
 Identities = 100/310 (32%), Positives = 159/310 (51%), Gaps = 21/310 (6%)

Query: 1   MGFFLETLFGGLMVGMLYSLIAIGFVLIYKASGVFNFAQGAMVLFAALAMARFSEWFPLW 60
           M  FL+  F GL VG +Y+LIA+GF LIY AS V NFAQG  V+   +        F + 
Sbjct: 1   MSEFLQLAFSGLTVGAIYALIALGFTLIYNASDVINFAQGDFVMIGGMGTV-----FLMA 55

Query: 61  FGFQSQILANILAFVAAMAVMVVVAWLIERLALSKLVNQEGITLLMATLGIAYFLDGIGQ 120
            G    + A +LA VAA    V+V  L+ RLA+        +TL+M T+G + F+ G+ Q
Sbjct: 56  AGLALPVAA-LLAVVAA----VLVGLLLHRLAIEPARGASPVTLIMITIGASIFIKGVSQ 110

Query: 121 TLFGNDIYKIDVGMPKEPLMVLEGTFQGGLLLSQEDLIAALVAAGLVVVLAIFFQKTATG 180
            +F    + +       P+ V      GG  +  + L     A  LVV L +F + T  G
Sbjct: 111 IIFDKQFHSLPAFSGDTPIPV------GGATILPQSLWVMGTALALVVALYLFLEHTLVG 164

Query: 181 RALRAVADDHQAAQSIGIPLKRIWVIVWSVAGFSALVAGIIWGSKLGVQFSL-SLVALKA 239
           +A+ A A +  AA+ +GI +  +  + + ++     +AG++       ++ + +L  LK 
Sbjct: 165 KAVLATAANRLAAKLVGINVALVLALAFGLSAAMGALAGVVATPITLTRYDIGTLFTLKG 224

Query: 240 LPVVILGGLTSIPGAIIGGLLIGVGEKLSEIYLGPMLGGGIEIWFAYVLALVFLLVRPQG 299
               +LGG+ +  GA++GGLLIG+ E  +  YL       +    A+++ LV LL  P+G
Sbjct: 225 FAAAMLGGMGNPVGAVVGGLLIGLIETFAAGYLSSTYKDAV----AFLMILVVLLFMPRG 280

Query: 300 LFGEKIIDRV 309
           LFG + ++RV
Sbjct: 281 LFGSRTVERV 290