Pairwise Alignments

Query, 309 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

 Score =  127 bits (318), Expect = 4e-34
 Identities = 93/318 (29%), Positives = 156/318 (49%), Gaps = 26/318 (8%)

Query: 2   GFFLETLFGGLMVGMLYSLIAIGFVLIYKASGVFNFAQGAMVLFAALAMARFSEWFPLWF 61
           G FL+ L  GL +G +Y LIAIG+ ++Y   G+ NFA G + + +A  +A  S     +F
Sbjct: 3   GIFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAY-LAAISLALLAYF 61

Query: 62  GFQSQILANILAFVAAMAVMVVVAWLIERLALSKLVNQEGITLLMATLGIAYFLDGIGQT 121
           G +S  L  +   +  + V  V  + IER+A   L N   +  L++ +GI+  L    Q 
Sbjct: 62  GVESFPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQI 121

Query: 122 LFGNDIYKIDVGMPKEPLMVLEGTFQ-----GGLLLSQED---LIAALVAAGLVVVLAIF 173
             G        G+P     +LEG  +     G + L+      L+AA V  GL   L   
Sbjct: 122 SQG----ARQQGVP----TLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGL---LTYV 170

Query: 174 FQKTATGRALRAVADDHQAAQSIGIPLKRIWVIVWSVAGFSALVAGIIWGSKLGV--QFS 231
            + T  GR  RA   D + A  +GI   R+   V+ +    A +AG++     G    ++
Sbjct: 171 IKYTKLGRMCRATQQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYA 230

Query: 232 LSLVALKALPVVILGGLTSIPGAIIGGLLIGVGEKLSEIYLGPMLGGGIEIWFAYVLALV 291
             ++ +KA    +LGG+ S+PGA++GG+++G+ E L       ++    +  F++ L ++
Sbjct: 231 GFIIGIKAFTAAVLGGIGSLPGAMLGGIILGISESL----FSGLINSDYKDVFSFSLLVM 286

Query: 292 FLLVRPQGLFGEKIIDRV 309
            L+ RPQGL G  ++ +V
Sbjct: 287 ILIFRPQGLLGRPLVAKV 304